Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011549.1 Kokia drynarioides strain JFW-HI SEQ_126535, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  194587

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1484--1531
24
2.0
24
100
0
96
20
8
20
50
1.74
16169--16232
30
2.1
31
85
2
85
45
6
14
34
1.70
17250--17351
23
4.5
22
74
12
91
41
23
22
12
1.88
17414--17461
24
1.9
26
84
16
66
31
20
0
47
1.50
22187--22211
2
12.5
2
100
0
50
48
0
0
52
1.00
23509--23567
27
2.2
26
82
11
75
59
1
1
37
1.18
32082--32148
35
1.9
35
93
0
116
19
28
7
44
1.77
48020--48054
17
2.0
18
88
5
54
5
14
8
71
1.29
56514--56556
16
2.8
15
82
6
59
44
0
0
55
0.99
56516--56564
16
3.1
16
80
8
55
46
0
0
53
1.00
56920--56954
16
2.2
16
89
0
52
22
5
0
71
1.07
57976--58008
2
17.0
2
87
6
50
48
0
51
0
1.00
69430--69463
17
2.0
17
88
0
50
64
0
0
35
0.94
80531--80575
14
3.2
15
81
9
51
35
2
0
62
1.08
81585--81611
12
2.2
12
100
0
54
0
22
7
70
1.12
81832--81869
2
19.0
2
100
0
76
0
0
50
50
1.00
89801--89871
32
2.2
32
79
0
88
29
14
11
45
1.79
89936--89971
18
2.0
18
88
0
54
22
5
16
55
1.62
90917--90950
18
1.9
18
88
5
52
29
11
41
17
1.85
91503--91560
21
2.8
21
78
2
73
8
8
46
36
1.65
101030--101190
59
2.6
59
74
14
148
52
13
3
30
1.58
116716--116749
12
3.0
11
87
8
50
79
8
0
11
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121285--121326
22
1.9
22
90
0
66
26
0
2
71
0.98
121926--122033
48
2.3
48
85
4
157
44
1
1
51
1.22
122785--122823
11
3.8
10
86
13
53
48
0
2
48
1.15
122759--122823
20
3.4
20
77
8
73
50
0
1
47
1.10
123305--123358
16
3.4
17
80
12
62
40
7
7
44
1.60
123455--123519
16
4.1
15
78
16
62
58
3
3
35
1.29
135821--135849
15
1.9
15
100
0
58
34
20
10
34
1.87
139711--139779
33
2.1
33
86
0
93
52
10
14
23
1.72
143310--143522
117
1.8
116
80
3
257
38
13
7
41
1.72
145734--145780
22
2.2
22
92
3
78
6
12
12
68
1.39
147836--147937
23
4.5
22
79
4
89
40
26
21
11
1.88
147904--147957
23
2.3
23
93
0
90
40
20
27
11
1.86
155053--155131
23
3.5
23
82
6
99
37
21
21
18
1.94
155049--155147
23
4.4
22
78
8
92
40
20
22
17
1.91
157904--157974
22
3.3
21
80
5
70
8
7
15
69
1.36
163119--163168
12
4.1
12
87
5
55
78
0
18
4
0.91
163126--163171
4
11.2
4
83
4
56
78
0
19
2
0.86
163945--163987
15
2.6
17
89
10
63
0
37
0
62
0.95
170362--170427
32
2.2
32
84
10
86
30
12
13
43
1.80
170675--170708
18
1.9
17
88
5
50
58
5
0
35
1.22
175307--175386
23
3.4
25
86
8
80
13
20
20
46
1.84
175319--175433
23
5.0
23
80
14
105
13
21
20
43
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
176621--176830
103
2.0
106
86
5
293
51
5
9
33
1.57
177019--177055
18
2.1
18
90
10
58
59
0
5
35
1.20
192259--192909
251
2.6
251
89
1
1000
25
11
11
51
1.72

Tables:   1

The End!