Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011552.1 Kokia drynarioides strain JFW-HI SEQ_126540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84618

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--107
16
2.4
17
82
17
53
37
0
2
59
1.12
730--762
15
2.2
15
94
0
57
69
6
24
0
1.10
1540--1573
1
34.0
1
87
0
50
0
5
0
94
0.32
1538--1573
12
3.0
12
100
0
72
0
8
0
91
0.41
5824--5866
23
2.0
22
86
13
63
55
2
0
41
1.12
5842--5900
25
2.4
24
80
11
66
61
0
0
38
0.96
5852--5900
25
1.9
25
87
4
71
63
0
0
36
0.95
6773--6847
31
2.4
30
82
4
78
53
13
5
28
1.61
6918--6943
2
13.0
2
100
0
52
50
0
0
50
1.00
10151--10180
8
3.8
8
100
0
60
23
26
10
40
1.86
13156--13198
5
8.8
5
87
5
52
2
2
11
83
0.83
15243--15281
3
13.0
3
100
0
78
66
0
0
33
0.92
31495--31542
22
2.3
21
85
7
62
70
0
0
29
0.87
33868--33892
12
2.1
12
100
0
50
32
12
32
24
1.91
34167--34303
69
2.0
69
98
0
265
30
8
7
53
1.59
42479--42503
5
5.0
5
100
0
50
20
0
0
80
0.72
46651--46716
31
2.3
31
84
10
86
31
9
15
43
1.77
60122--60198
9
8.1
9
68
21
50
35
3
1
59
1.24
65500--65531
2
16.0
2
100
0
64
50
0
0
50
1.00
65744--65782
2
19.5
2
94
0
69
0
46
0
53
1.00
65857--65899
21
2.0
22
90
4
70
53
0
11
34
1.37
79590--79738
59
2.5
57
80
7
163
48
3
1
46
1.27

Tables:   1

The End!