Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011555.1 Kokia drynarioides strain JFW-HI SEQ_126543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  135577

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7903--7976
26
2.8
26
87
4
105
32
28
20
18
1.96
22322--22367
23
1.9
25
86
8
69
43
17
10
28
1.82
46642--46717
29
2.6
29
89
4
107
1
14
5
77
0.99
46642--46735
29
3.2
29
82
8
84
3
13
7
74
1.15
49106--49145
22
1.9
21
85
10
55
30
22
12
35
1.91
51833--51907
37
2.0
37
94
0
132
37
14
17
30
1.90
72949--73001
26
2.0
26
92
0
88
28
20
20
30
1.98
72958--73010
26
2.0
26
88
0
79
30
18
22
28
1.98
85044--85080
17
2.1
18
90
5
58
62
8
5
24
1.44
88071--88110
21
1.9
21
90
10
64
30
0
15
55
1.41
93732--93772
18
2.4
17
87
4
55
75
0
7
17
1.02
102921--102963
21
2.0
21
86
0
59
55
13
30
0
1.39
107655--107693
19
2.0
20
90
5
62
74
5
12
7
1.20
107655--107693
20
2.0
19
85
14
53
74
5
12
7
1.20
110242--110280
18
2.2
18
86
9
53
28
2
12
56
1.50
118556--118731
24
7.4
24
86
1
237
28
23
21
27
1.99
123020--123147
47
2.7
47
80
6
123
29
21
22
26
1.99
123020--123147
24
5.4
24
81
5
116
29
21
22
26
1.99
130150--130188
19
2.1
19
100
0
78
48
15
10
25
1.76
133717--133846
48
2.7
48
89
0
197
25
10
14
49
1.76

Tables:   1

The End!