Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011559.1 Kokia drynarioides strain JFW-HI SEQ_126548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75325

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2472--2516
19
2.4
19
81
7
56
37
0
4
57
1.19
3602--3647
17
2.7
17
86
6
58
28
2
0
69
1.00
3607--3662
29
2.0
28
82
10
69
25
1
1
71
1.05
3621--3692
22
3.0
22
78
20
74
19
1
2
76
0.99
3630--3679
26
1.9
26
84
8
66
18
2
4
76
1.04
4023--4089
19
3.4
19
72
22
57
70
17
4
7
1.28
4003--4099
41
2.4
41
82
3
106
69
17
5
8
1.33
3985--4102
30
3.9
31
72
7
93
68
17
5
8
1.34
6517--6564
21
2.3
21
77
0
60
33
2
0
64
1.05
12523--12547
13
1.9
13
100
0
50
44
8
8
40
1.63
13229--13269
13
3.2
13
74
19
50
46
4
2
46
1.37
15712--15758
22
2.1
22
81
14
53
34
2
2
61
1.20
15735--15766
15
2.1
16
94
5
57
34
0
0
65
0.93
18283--18346
27
2.4
25
80
10
74
60
4
6
28
1.41
21216--21242
2
13.5
2
100
0
54
51
0
0
48
1.00
28721--29017
160
1.9
160
88
2
454
32
19
16
31
1.94
34001--34083
17
5.4
16
66
22
54
54
9
0
36
1.33
34014--34105
26
3.2
28
64
19
71
55
9
0
34
1.33
34052--34081
15
2.1
14
93
6
51
56
6
0
36
1.26
33986--34105
59
2.0
59
95
3
215
55
10
0
35
1.34
34135--34181
16
2.9
16
75
15
51
65
0
0
34
0.93
34141--34202
8
7.5
8
79
18
65
64
0
0
35
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36467--36558
42
2.2
42
100
0
184
26
28
17
28
1.98
40764--40810
20
2.2
20
85
7
58
36
0
2
61
1.08
40777--40818
20
2.2
18
91
8
66
42
0
0
57
0.99
43702--43744
5
8.6
5
100
0
86
18
0
0
81
0.69
44266--44326
22
2.7
23
77
10
63
11
6
14
67
1.41
45168--45242
29
2.6
29
93
4
125
45
4
17
33
1.67
65192--65248
22
2.6
22
77
0
60
42
1
3
52
1.28
65452--65497
5
9.4
5
78
21
53
60
2
0
36
1.09
65441--65495
24
2.3
24
90
6
85
58
1
0
40
1.09
65691--65746
28
2.2
25
82
17
71
41
1
5
51
1.35
65911--65944
15
2.3
15
89
0
50
26
0
0
73
0.83
67891--68301
57
7.0
57
77
7
374
28
19
17
34
1.95
67888--68280
117
3.3
117
81
9
442
29
19
17
33
1.95
71940--72005
11
5.9
11
81
10
80
42
1
1
54
1.18
71947--72015
6
12.0
6
75
20
67
46
2
1
49
1.25
71937--72002
17
3.9
17
84
9
91
42
1
1
54
1.18
72606--72643
18
2.1
19
95
0
53
39
5
13
42
1.66
73863--74149
29
9.8
28
69
11
132
39
29
2
28
1.70
73849--74218
58
6.3
59
78
4
356
38
28
3
29
1.73
73849--74218
117
3.2
113
81
6
364
38
28
3
29
1.73
73839--74163
29
11.1
29
65
10
117
38
29
2
28
1.71

Tables:   1

The End!