Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011576.1 Kokia drynarioides strain JFW-HI SEQ_126565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  148175

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1180--1468
30
9.7
30
80
7
270
34
29
2
32
1.72
1180--1468
59
4.9
59
86
1
355
34
29
2
32
1.72
1514--1573
28
2.1
29
84
3
77
33
28
11
26
1.91
11496--11528
16
2.1
16
100
0
66
27
18
6
48
1.71
12854--12987
33
4.1
31
79
8
110
23
42
1
32
1.63
12811--12980
66
2.6
66
79
10
161
22
44
1
31
1.64
12872--12987
33
3.6
31
79
10
117
21
43
1
32
1.63
14000--14061
16
3.8
16
78
4
70
22
6
32
38
1.80
16729--16781
21
2.5
21
90
0
79
28
30
15
26
1.96
21171--21219
25
1.9
26
95
4
91
65
0
0
34
0.93
21451--21490
21
1.9
21
94
0
71
57
2
0
40
1.12
21451--21502
18
2.7
20
85
8
63
53
1
0
44
1.11
25686--25724
16
2.3
18
86
8
55
17
5
7
69
1.32
31514--31552
16
2.3
18
86
8
55
17
5
7
69
1.32
33044--33218
18
9.9
18
69
22
63
58
4
4
32
1.39
33132--33174
20
2.0
22
86
8
63
58
2
2
37
1.24
33135--33182
21
2.3
22
79
17
57
64
2
6
27
1.28
33187--33241
18
3.0
19
82
12
62
60
1
5
32
1.30
33029--33297
137
1.9
134
88
7
396
60
4
3
30
1.35
33259--33293
18
1.9
18
88
0
52
65
8
0
25
1.21
37599--37644
24
1.9
23
86
8
65
56
6
4
32
1.45
38677--38730
10
5.5
10
84
2
65
11
11
1
75
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38666--38724
20
2.8
20
84
5
73
8
15
1
74
1.13
38677--38730
20
2.8
20
88
2
74
11
11
1
75
1.11
39651--39676
6
4.3
6
100
0
52
84
0
0
15
0.62
45067--45212
29
5.1
28
88
5
222
43
6
19
31
1.75
45067--45195
15
9.1
15
64
25
66
43
5
19
31
1.74
45067--45212
56
2.6
57
91
5
233
43
6
19
31
1.75
45067--45192
14
8.9
14
65
23
68
43
5
18
32
1.73
49819--49845
14
1.9
14
100
0
54
44
3
0
51
1.19
50575--50704
26
5.0
26
80
1
125
39
18
21
20
1.93
50575--50704
53
2.5
52
83
1
143
39
18
21
20
1.93
50593--50704
52
2.1
53
85
1
145
40
19
19
20
1.92
58145--58201
28
2.0
28
89
0
87
35
15
15
33
1.90
75606--76060
227
2.0
227
100
0
910
24
22
18
34
1.96
77253--77293
20
2.0
21
85
4
57
65
4
0
29
1.13
77564--77591
13
2.2
13
100
0
56
25
14
25
35
1.93
79491--79528
19
2.0
19
90
10
60
42
15
7
34
1.76
83146--83531
192
2.0
192
84
3
508
32
17
30
20
1.95
89629--89738
23
4.8
23
86
0
130
29
13
23
33
1.93
100198--100285
24
3.7
24
84
3
115
28
22
22
26
1.99
100326--100885
276
2.0
276
97
1
1050
29
13
18
37
1.90
102605--102724
57
2.1
57
95
0
213
30
19
17
33
1.95
109831--109872
22
1.9
22
90
0
66
28
16
21
33
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119724--119765
17
2.5
17
81
11
50
54
19
9
16
1.69
126245--126270
12
2.2
12
100
0
52
0
7
34
57
1.27
129509--129550
22
1.9
22
95
0
75
30
21
19
28
1.97
141764--141797
15
2.3
15
90
10
52
26
32
23
17
1.97
147985--148044
15
3.9
15
75
16
59
51
3
0
45
1.17

Tables:   1

The End!