Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011598.1 Kokia drynarioides strain JFW-HI SEQ_126588, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41021

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1678
858
2.0
848
100
0
3266
33
19
21
25
1.97
2615--3640
139
7.4
139
88
1
1534
36
19
23
20
1.95
2615--3636
278
3.7
278
94
0
1720
36
19
23
20
1.95
4785--4820
3
11.7
3
94
5
63
66
0
0
33
0.92
5859--6272
30
14.0
29
67
21
186
31
28
4
34
1.78
5897--6157
29
8.9
29
68
14
144
30
30
4
34
1.78
5876--6283
59
6.9
58
81
8
427
31
28
4
35
1.78
5850--6155
89
3.5
89
72
11
227
31
29
4
34
1.78
5867--6258
117
3.3
115
84
7
479
31
29
4
34
1.78
10409--10464
24
2.3
24
87
0
76
50
5
17
26
1.68
12394--12444
24
2.1
24
92
0
84
54
5
11
27
1.59
16255--16290
3
11.7
3
94
5
63
66
0
0
33
0.92
17329--17742
30
14.0
29
67
21
186
31
28
4
34
1.78
17367--17627
29
8.9
29
68
14
144
30
30
4
34
1.78
17346--17753
59
6.9
58
81
8
427
31
28
4
35
1.78
17320--17625
89
3.5
89
72
11
227
31
29
4
34
1.78
17337--17728
117
3.3
115
84
7
479
31
29
4
34
1.78
21879--21934
24
2.3
24
87
0
76
50
5
17
26
1.68
23864--23914
24
2.1
24
92
0
84
54
5
11
27
1.59
27518--27586
20
3.5
19
78
9
66
37
4
0
57
1.18
27533--27586
21
2.7
20
83
13
58
33
1
0
64
1.04
27534--27605
20
3.6
20
80
14
69
31
1
1
65
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27546--27603
30
1.9
31
82
10
75
32
0
1
65
1.03
27919--27944
7
3.7
7
100
0
52
38
30
0
30
1.58
29856--29949
28
3.4
27
73
5
91
20
19
6
54
1.65
29874--29962
28
3.2
28
69
6
81
17
22
6
52
1.68
32953--33048
28
3.5
26
72
9
84
22
17
6
53
1.66
32960--33076
56
2.1
55
80
4
128
23
18
5
52
1.65
37243--37321
36
2.2
36
83
0
95
34
8
18
37
1.82
37645--37801
10
15.0
10
70
21
67
39
2
19
38
1.65
37657--37801
59
2.5
59
93
1
238
39
2
19
38
1.66
37763--37796
9
3.7
9
84
7
50
38
2
17
41
1.65
37717--37776
26
2.4
26
78
15
74
40
3
20
36
1.69
37650--37838
58
3.2
58
85
4
238
37
3
20
39
1.68
40118--40171
10
5.5
10
79
14
51
29
1
0
68
1.00
40136--40177
21
2.0
22
90
4
68
28
0
2
69
1.01

Tables:   1

The End!