Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011605.1 Kokia drynarioides strain JFW-HI SEQ_126595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72316

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3756--3964
12
18.2
12
67
11
98
66
20
6
6
1.39
3744--3826
24
3.7
22
84
14
107
69
19
4
6
1.27
3723--3826
44
2.4
44
86
3
138
68
20
3
7
1.31
3723--3826
24
4.8
20
76
16
91
68
20
3
7
1.31
3773--3863
36
2.5
35
85
3
110
69
19
4
6
1.29
3882--3966
23
3.8
22
80
16
95
64
22
7
5
1.40
6524--6671
72
2.1
72
85
0
197
37
18
14
29
1.90
7620--7662
21
2.0
21
100
0
86
13
18
25
41
1.88
10142--10216
29
2.5
30
82
8
91
45
13
8
33
1.72
15343--15691
30
11.9
29
85
5
436
36
3
25
34
1.72
17570--17887
30
10.9
29
79
8
317
38
3
23
34
1.73
17608--17880
58
4.7
57
83
8
320
38
3
22
35
1.71
17594--17886
87
3.4
86
84
7
353
37
3
23
35
1.72
20006--20041
14
2.6
14
90
0
54
33
25
2
38
1.70
37033--37104
30
2.4
31
86
6
94
45
19
15
19
1.85
37892--37963
30
2.4
31
83
6
85
20
12
18
48
1.80
40287--40594
69
4.5
69
77
6
277
36
23
22
18
1.95
40312--40572
138
1.9
138
82
6
332
38
22
21
17
1.93
40287--40594
138
2.2
137
76
7
320
36
23
22
18
1.95
40541--40645
54
1.9
54
84
0
138
35
24
20
20
1.96
40644--42350
120
14.2
120
92
0
2605
34
20
25
18
1.96
40669--42366
60
28.3
60
85
0
2154
34
20
25
18
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48774--48813
20
2.0
21
95
5
73
37
7
0
55
1.29
58686--58748
32
1.9
32
84
15
85
60
1
1
36
1.16
60373--60403
12
2.5
13
94
5
55
16
22
0
61
1.34
61173--61207
17
2.1
17
88
0
52
22
28
17
31
1.96
62777--62848
17
4.2
17
71
16
60
63
0
0
36
0.94
63589--63702
12
9.6
12
76
1
95
66
21
5
7
1.36
63595--63697
35
2.9
34
85
4
125
66
19
5
7
1.37
63704--63781
20
3.8
20
78
11
95
66
19
8
5
1.38
68025--68088
24
2.7
24
92
0
110
28
12
3
56
1.51
68025--68096
24
3.1
22
81
13
56
27
12
4
55
1.55

Tables:   1

The End!