Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001161.1 Kokia drynarioides strain JFW-HI SEQ_112482, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89511

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1276--1318
17
2.5
17
100
0
86
20
0
37
41
1.53
5432--5467
18
1.9
19
88
5
56
77
0
5
16
0.94
9381--9407
13
2.1
13
100
0
54
22
7
7
62
1.46
17072--18183
285
4.0
273
82
10
1254
44
19
12
23
1.84
23034--23089
11
5.1
11
77
16
53
76
8
0
14
1.00
31238--31291
26
2.1
28
83
13
71
44
0
1
53
1.11
34863--34888
5
5.2
5
100
0
52
0
19
0
80
0.71
35593--35655
17
3.8
16
76
20
58
61
0
1
36
1.05
35591--35639
23
2.1
23
85
7
64
59
0
2
38
1.09
35615--35655
9
4.6
9
77
22
50
60
0
0
39
0.96
43373--43416
14
3.1
14
73
0
52
31
22
6
38
1.81
46061--46188
64
2.0
64
100
0
256
46
18
9
25
1.79
58230--58683
138
3.3
136
81
6
506
26
14
22
36
1.93
65404--65455
25
2.1
25
100
0
104
40
32
7
19
1.80
76354--76400
22
2.1
23
96
4
87
40
8
8
42
1.66
88640--88676
16
2.3
16
86
13
58
40
0
0
59
0.97
88705--88765
25
2.4
26
80
2
79
54
0
1
44
1.10
88778--88822
13
3.4
13
77
17
56
57
2
4
35
1.31

Tables:   1

The End!