Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011612.1 Kokia drynarioides strain JFW-HI SEQ_126602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42342

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358--423
17
3.9
16
76
5
60
56
6
0
37
1.24
1464--1524
28
2.2
28
88
2
88
52
8
18
21
1.71
12545--12620
6
12.2
6
78
15
66
77
0
5
17
0.94
12545--12610
26
2.7
23
76
19
55
77
0
6
16
0.96
13775--13943
87
1.9
87
90
0
266
31
15
16
36
1.90
23401--23453
21
2.5
22
75
9
56
33
26
9
30
1.88
23518--23572
24
2.4
24
80
14
64
36
23
7
32
1.82
24219--24300
26
3.2
26
65
13
69
40
23
9
26
1.85
24190--24322
52
2.6
52
92
3
216
40
24
12
23
1.88
36442--36473
13
2.5
13
94
0
55
37
15
0
46
1.46
36468--36504
13
2.8
13
91
0
56
37
16
5
40
1.71
38869--38910
19
2.2
20
87
8
61
40
0
2
57
1.12
39316--39355
20
2.0
20
85
4
55
42
7
2
47
1.45
41320--41388
17
4.1
17
75
7
68
36
1
7
55
1.37
41324--41393
34
2.1
34
86
0
95
35
2
5
55
1.38
41328--41399
17
4.2
16
75
10
63
40
2
4
52
1.35
42109--42152
3
14.7
3
90
0
70
61
0
0
38
0.96

Tables:   1

The End!