Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011620.1 Kokia drynarioides strain JFW-HI SEQ_126610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41192

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3399--3548
23
6.5
22
77
12
117
11
24
22
42
1.86
6169--6299
62
2.1
62
98
0
253
27
22
29
20
1.99
6811--7023
39
5.4
39
77
6
196
38
17
17
26
1.92
8632--8687
17
3.3
17
82
9
69
39
0
7
53
1.28
8631--8704
34
2.2
33
82
2
85
40
1
5
52
1.33
9328--9638
96
3.2
97
82
5
326
38
22
25
13
1.90
9328--9625
48
6.2
48
78
7
291
39
22
25
12
1.89
10315--10419
6
18.2
6
73
11
94
43
0
1
54
1.11
10304--10419
17
6.4
17
75
13
106
42
0
2
55
1.13
10321--10399
11
6.9
11
78
9
70
40
0
2
56
1.12
10315--10387
23
3.2
22
88
7
101
42
0
2
54
1.14
10315--10400
23
3.7
23
78
7
68
41
0
2
55
1.12
11089--11174
3
28.3
3
80
6
84
60
3
3
32
1.30
12287--12885
29
20.4
29
69
16
276
30
26
3
39
1.74
12289--12884
59
10.1
58
76
11
360
30
26
3
38
1.74
12289--12884
58
10.1
58
77
10
432
30
26
3
38
1.74
12289--12884
176
3.4
174
79
9
559
30
26
3
38
1.74
18138--18234
29
3.4
28
73
13
81
37
8
5
49
1.55
18153--18271
28
4.1
28
76
9
105
38
9
4
47
1.55
20545--20709
62
2.8
60
83
4
208
47
13
21
16
1.82
21972--22006
16
2.2
16
89
0
52
54
2
0
42
1.15
24264--24306
18
2.4
18
84
7
52
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25636--25674
20
2.0
19
90
5
60
53
0
0
46
1.00
27909--27944
6
6.2
6
87
6
56
33
0
63
2
1.08
28153--28196
6
7.3
6
89
0
61
47
0
34
18
1.49
33064--33322
30
8.8
29
80
9
172
40
22
2
34
1.68
33401--33435
3
11.7
3
100
0
70
31
0
0
68
0.90
33460--33498
19
2.0
20
85
5
53
17
2
2
76
1.01
33926--33952
11
2.5
11
100
0
54
22
14
0
62
1.31

Tables:   1

The End!