Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011621.1 Kokia drynarioides strain JFW-HI SEQ_126612, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123396

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8362--8414
27
1.9
28
82
17
67
16
5
39
37
1.73
10524--10567
21
2.0
22
86
4
63
34
9
13
43
1.76
14211--14265
28
1.9
29
92
3
94
29
3
1
65
1.20
16756--16789
14
2.4
15
85
14
54
52
5
11
29
1.61
35514--35557
16
2.6
17
82
13
56
47
0
2
50
1.13
47136--47168
6
5.5
6
92
0
57
33
51
0
15
1.43
48612--48673
28
2.2
28
78
16
74
33
30
0
35
1.58
49194--49222
15
2.0
15
93
6
51
51
0
0
48
1.00
56648--56714
31
2.2
31
86
5
91
35
14
7
41
1.75
60849--60889
22
2.0
20
85
9
55
48
2
4
43
1.37
64990--65015
2
13.0
2
100
0
52
50
0
0
50
1.00
65486--65511
2
13.0
2
100
0
52
50
0
0
50
1.00
65400--65588
100
1.9
100
87
0
279
41
5
8
43
1.58
65707--65756
25
2.0
25
81
18
59
62
6
0
32
1.20
69891--69978
21
4.3
21
80
12
103
9
6
14
69
1.35
69891--69989
21
4.8
20
79
12
96
8
6
16
69
1.33
69972--70040
12
5.8
12
77
3
59
5
4
20
69
1.27
69998--70107
24
4.8
24
71
10
86
10
4
14
70
1.32
70016--70110
27
3.5
27
73
11
86
11
5
14
68
1.37
70007--70049
12
3.6
12
83
0
59
11
4
11
72
1.27
70018--70123
55
1.9
55
86
0
149
11
5
16
66
1.40
69963--70135
55
3.1
54
74
12
145
10
5
16
67
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74129--74188
29
2.0
30
90
3
95
45
0
5
50
1.23
77121--77145
11
2.3
11
100
0
50
40
8
8
44
1.63
87345--87387
15
2.9
14
86
10
50
37
0
4
58
1.19
90584--90613
6
5.2
6
96
4
53
30
0
16
53
1.44
92332--92399
35
1.9
35
93
0
118
51
8
4
35
1.53
111216--111301
31
2.9
30
81
5
93
41
13
11
32
1.81
116536--116576
18
2.3
18
87
8
57
58
2
2
36
1.24
119924--119958
9
3.8
9
92
3
52
22
0
0
77
0.78
120156--120201
11
4.3
11
78
13
51
71
4
0
23
1.03

Tables:   1

The End!