Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011624.1 Kokia drynarioides strain JFW-HI SEQ_126615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80020

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3076--3119
14
2.9
16
83
16
67
63
0
0
36
0.95
3076--3144
29
2.3
31
82
5
79
56
0
1
42
1.08
3076--3155
30
2.7
30
80
5
83
55
0
2
42
1.13
8293--8430
28
5.2
28
69
19
116
36
17
25
20
1.94
8317--8457
24
5.5
24
72
18
106
34
17
28
20
1.95
8293--8454
52
3.1
52
92
0
270
35
17
26
20
1.94
10853--10885
18
1.9
17
88
11
50
30
21
0
48
1.50
15572--15612
3
13.7
3
100
0
82
31
0
0
68
0.90
18767--18822
3
18.7
3
100
0
112
66
0
0
33
0.92
28725--28773
24
2.0
24
100
0
98
32
22
8
36
1.84
30376--30453
3
26.7
3
94
5
142
32
0
0
67
0.90
37969--37994
6
4.3
6
100
0
52
30
0
50
19
1.48
40001--40052
21
2.6
19
85
11
61
36
0
0
63
0.95
40581--40613
2
16.5
2
100
0
66
51
0
0
48
1.00
45211--45256
24
1.9
24
86
0
65
56
2
4
36
1.31
47413--47441
15
1.9
15
100
0
58
62
0
0
37
0.96
49483--49744
50
5.2
50
82
0
308
22
26
19
32
1.97
49451--49745
101
2.9
100
81
1
329
22
26
18
32
1.97
49452--49744
151
1.9
151
83
1
381
21
26
18
32
1.97
49926--50028
50
2.1
50
92
0
170
19
20
19
40
1.91
60123--60296
87
2.0
86
97
1
330
31
18
24
24
1.97

Tables:   1

The End!