Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011626.1 Kokia drynarioides strain JFW-HI SEQ_126617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41142

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120--174
20
2.8
20
85
0
74
40
34
18
7
1.78
3675--3739
18
3.4
18
80
6
67
43
1
26
29
1.64
4498--4551
18
2.9
18
83
2
72
46
0
22
31
1.52
4643--4794
23
6.5
22
85
10
169
11
29
21
38
1.88
4643--4793
48
3.2
45
81
13
171
11
29
21
37
1.88
4643--4792
71
2.1
71
86
4
205
11
30
21
37
1.88
7009--7053
6
7.5
6
89
0
63
22
31
0
46
1.52
12259--12301
19
2.3
19
84
8
52
67
2
4
25
1.22
20367--20407
16
2.5
17
84
11
59
56
0
0
43
0.99
32480--32513
12
2.8
12
86
0
50
44
0
0
55
0.99
32772--32826
19
2.8
20
76
13
62
45
0
0
54
0.99
32772--32837
19
3.3
21
71
16
59
46
0
0
53
1.00
33778--33830
27
2.0
27
96
0
97
47
0
7
45
1.31
38831--38874
10
4.4
10
83
11
54
59
0
2
38
1.10
38829--38876
20
2.3
22
86
13
75
58
0
2
39
1.10
39197--39266
18
3.8
18
81
9
79
30
1
1
67
1.08
39198--39266
9
7.4
9
72
4
57
30
1
1
66
1.09
39217--39270
28
1.9
28
85
7
74
29
0
0
70
0.88

Tables:   1

The End!