Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011627.1 Kokia drynarioides strain JFW-HI SEQ_126618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  128154

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
302--355
26
2.1
26
85
0
72
51
0
3
44
1.19
3216--3296
33
2.6
32
80
7
87
44
14
9
30
1.78
4579--4650
21
3.4
21
67
7
65
11
5
20
62
1.48
4570--4657
42
2.1
42
100
0
176
11
4
20
63
1.44
9195--9359
82
2.0
82
98
0
321
32
7
16
44
1.75
11222--11357
52
2.6
52
85
2
193
24
16
25
33
1.96
12651--12677
12
2.2
12
100
0
54
0
25
0
74
0.83
17750--17818
27
2.5
27
80
4
66
37
5
14
42
1.70
17976--18023
12
3.8
12
78
10
51
39
4
0
56
1.19
23661--23717
29
1.9
30
85
3
80
28
14
29
28
1.95
23778--24113
30
11.4
30
70
15
177
32
3
28
35
1.74
23743--24181
29
15.0
29
75
12
292
32
4
28
34
1.77
23778--24181
59
6.9
57
79
9
341
32
3
28
34
1.76
23787--24183
29
13.5
30
77
10
338
31
4
28
35
1.77
25401--25447
20
2.3
20
88
0
67
12
12
25
48
1.77
25921--25991
11
6.4
11
76
9
72
52
4
0
43
1.20
25921--25984
6
11.3
6
78
9
64
51
4
0
43
1.22
25921--25966
17
2.8
16
93
3
74
50
4
0
45
1.21
25921--25984
23
2.8
23
84
11
87
51
4
0
43
1.22
28110--28152
15
2.8
15
83
13
52
48
0
4
46
1.22
29671--29760
44
2.0
44
100
0
180
25
24
16
33
1.96
32488--32554
29
2.3
29
84
0
89
47
8
8
34
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33542--33582
2
20.5
2
100
0
82
0
0
48
51
1.00
36553--36612
32
1.9
31
86
10
86
45
1
8
45
1.43
43046--43071
3
8.7
3
100
0
52
0
0
65
34
0.93
43862--43903
10
4.3
10
79
14
52
26
0
7
66
1.17
43845--43903
29
2.0
29
83
6
75
28
5
5
61
1.39
43973--44065
19
4.9
19
64
10
55
45
20
5
29
1.73
44215--44253
19
2.1
19
95
0
69
41
12
5
41
1.65
47301--47737
222
2.0
221
86
1
615
41
21
13
23
1.88
53187--53234
24
2.0
26
84
12
66
56
0
0
43
0.99
55552--55594
21
2.0
21
90
0
68
48
6
4
39
1.51
56404--56675
136
2.0
137
90
5
419
31
22
9
36
1.86
57077--57124
18
2.5
20
80
16
57
33
0
4
62
1.14
58049--58092
18
2.4
18
80
3
61
38
6
2
52
1.41
71447--71510
30
2.1
31
82
8
78
10
9
4
75
1.19
74576--74621
20
2.3
20
82
14
51
36
8
0
54
1.32
82977--83011
12
2.8
13
82
8
54
0
60
0
40
0.97
82977--83019
18
2.3
19
88
4
61
0
60
0
39
0.97
83874--83914
11
3.9
11
84
9
59
53
0
0
46
1.00
84572--84619
19
2.6
18
81
15
53
41
2
6
50
1.39
85589--86098
40
12.9
40
81
5
441
25
16
24
33
1.96
85589--86099
80
6.4
80
78
4
507
25
16
24
33
1.96
85870--85956
38
2.3
38
93
0
147
31
14
16
37
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89911--89964
22
2.5
21
76
8
63
46
7
12
33
1.70
98432--98458
9
3.0
9
100
0
54
0
0
11
88
0.50
99262--99293
12
2.6
12
95
5
55
18
0
0
81
0.70
103010--103094
42
2.0
42
100
0
170
38
25
16
18
1.92
105285--105342
18
3.2
18
82
0
80
22
18
44
13
1.85
106204--106496
49
6.0
48
76
10
274
18
24
17
39
1.92
106192--106508
98
3.2
97
83
4
370
17
25
17
39
1.91
119416--119462
18
2.6
18
86
10
69
23
12
51
12
1.74
125673--125726
21
2.6
21
79
5
65
29
25
16
27
1.97

Tables:   1

The End!