Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01011629.1 Kokia drynarioides strain JFW-HI SEQ_126620, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 796

Length: 1327
ACGTcount: A:0.37, C:0.14, G:0.15, T:0.33


Found at i:761 original size:13 final size:13

Alignment explanation


    Indices: 743--770  Score: 56
    Period size: 13  Copynumber: 2.2  Consensus size: 13

        733 TGAAAATTCG

                         
        743 TTAATGGTACATT
          1 TTAATGGTACATT

                         
        756 TTAATGGTACATT
          1 TTAATGGTACATT

              
        769 TT
          1 TT

        771 CCCCTATATT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   15  1.00

ACGTcount: A:0.29, C:0.07, G:0.14, T:0.50


Consensus pattern (13 bp):   
TTAATGGTACATT
Done.