Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011634.1 Kokia drynarioides strain JFW-HI SEQ_126625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  124361

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2159--2202
21
2.1
21
86
0
61
34
2
4
59
1.30
3611--3635
5
5.0
5
100
0
50
20
0
0
80
0.72
3653--3701
19
2.6
19
78
12
57
36
0
6
57
1.24
4499--4528
16
1.9
16
93
6
53
16
13
0
70
1.18
4494--4554
22
2.8
22
87
7
72
14
11
1
72
1.20
4508--4554
21
2.2
22
92
3
78
14
8
2
74
1.15
5086--5119
15
2.3
15
90
10
52
29
5
11
52
1.61
26165--26201
10
3.9
10
86
13
60
21
0
0
78
0.75
26165--26200
18
2.0
18
100
0
72
22
0
0
77
0.76
35676--35719
22
2.0
22
82
4
54
31
2
4
61
1.28
35930--35999
29
2.3
29
85
4
86
32
8
15
42
1.77
35929--36009
31
2.7
30
82
5
92
30
7
14
46
1.72
36152--36240
31
3.0
30
80
4
99
38
13
12
35
1.82
40364--40389
3
8.7
3
100
0
52
34
0
30
34
1.58
41469--41534
34
1.9
34
82
11
82
57
6
1
34
1.33
42276--42310
10
3.4
10
84
7
52
60
8
11
20
1.57
43028--43055
2
14.0
2
100
0
56
50
0
0
50
1.00
44410--44535
23
5.3
23
77
12
107
39
19
28
11
1.87
44406--44535
48
2.8
46
77
14
133
40
19
27
12
1.87
47502--47816
171
1.8
173
82
5
406
43
0
31
24
1.59
48496--48566
31
2.3
31
90
0
106
18
15
12
53
1.73
49730--49779
25
2.0
24
85
11
66
56
2
0
42
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71577--71627
24
2.1
24
92
0
84
23
11
9
54
1.66
71585--71639
24
2.3
24
87
0
74
27
14
10
47
1.78
73500--73545
25
1.9
23
86
8
65
36
4
4
54
1.40
74562--74604
18
2.3
19
88
8
61
23
2
2
72
1.08
74539--74610
33
2.1
37
82
17
93
22
6
2
68
1.27
74594--74625
14
2.4
13
90
10
55
25
3
0
71
1.00
80069--80111
10
4.3
10
82
11
52
72
2
4
20
1.14
80075--80101
11
2.5
11
100
0
54
77
0
7
14
0.97
80124--80183
12
5.2
11
84
11
68
16
5
1
76
1.04
80124--80184
6
10.8
5
88
10
59
18
4
1
75
1.06
80933--80986
26
2.1
26
100
0
108
25
33
22
18
1.97
81163--81202
14
2.7
15
84
7
55
75
0
15
10
1.05
81163--81202
15
2.7
14
84
7
53
75
0
15
10
1.05
82216--82261
25
1.9
23
86
8
65
36
4
4
54
1.40
83701--83763
24
2.6
24
84
0
81
26
14
9
49
1.74
88565--88598
17
2.0
17
94
0
59
44
0
2
52
1.16
91550--91590
6
6.8
6
83
10
57
17
2
14
65
1.37
91698--91738
22
1.9
21
85
5
55
48
12
2
36
1.54
94841--94904
21
3.0
21
75
11
67
26
3
0
70
1.02
105396--105422
4
6.8
4
100
0
54
77
0
0
22
0.76
113051--113096
24
1.9
24
86
0
65
52
0
10
36
1.37
113754--113799
20
2.3
21
81
11
60
50
0
2
47
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
116707--116801
6
16.0
6
74
10
88
41
0
3
55
1.15
116707--116801
29
3.2
29
81
11
104
41
0
3
55
1.15
116700--116739
11
3.5
11
90
6
62
37
2
0
60
1.11
116719--116799
17
4.6
17
86
6
108
40
0
3
55
1.17
116719--116800
35
2.3
35
89
6
121
41
0
3
54
1.18
117535--117586
12
4.2
13
82
7
72
57
1
1
38
1.21
117535--117586
25
2.1
25
92
0
86
57
1
1
38
1.21
117599--117655
21
2.7
21
83
2
69
56
3
5
35
1.39
117940--117997
24
2.6
21
78
10
71
60
3
20
15
1.49
118727--119046
29
10.9
30
73
12
188
35
24
5
34
1.78
118730--119194
58
7.9
58
74
8
293
34
23
5
36
1.79
122179--122209
8
3.9
8
91
0
53
64
6
0
29
1.18
122179--122215
16
2.2
17
95
4
67
64
5
0
29
1.15

Tables:   1

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