Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011637.1 Kokia drynarioides strain JFW-HI SEQ_126628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  113864

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
465--564
33
3.0
33
81
8
123
28
21
20
31
1.98
8012--8080
23
2.8
25
71
22
65
65
4
1
28
1.21
8027--8060
17
1.9
18
88
5
52
73
2
0
23
0.97
8020--8064
6
7.5
6
87
7
56
68
2
0
28
1.01
13076--13104
3
9.7
3
100
0
58
0
34
0
65
0.93
17376--17426
24
2.1
25
88
3
77
54
3
1
39
1.30
20001--20033
17
1.9
17
100
0
66
6
24
0
69
1.10
23888--23943
19
2.9
19
83
2
76
50
0
23
26
1.50
33834--33880
23
2.0
23
100
0
94
36
4
8
51
1.52
35298--35412
56
2.1
56
93
0
194
41
7
8
41
1.65
47177--47225
25
2.0
25
84
4
64
24
10
18
46
1.79
65242--65291
20
2.5
20
81
15
50
42
14
0
44
1.44
67506--67614
51
2.1
51
89
0
164
58
2
0
37
1.19
82229--82300
28
2.4
29
93
6
119
47
1
0
51
1.09
82263--82309
20
2.4
20
86
10
62
51
0
0
48
1.00
94042--94099
23
2.5
23
78
16
66
0
29
1
68
0.99
94709--94747
13
3.0
13
96
0
69
38
28
0
33
1.57
98766--98811
19
2.5
18
82
6
56
41
0
6
52
1.27
100390--100477
45
2.0
45
84
4
115
17
20
12
50
1.78
103165--103237
22
3.3
22
77
7
94
15
6
16
61
1.53
103148--103237
44
2.0
44
100
0
180
15
6
15
62
1.52
103153--103219
22
3.2
20
72
15
71
13
5
16
64
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103340--103457
61
1.9
61
82
3
148
33
7
12
45
1.71
108713--108775
31
2.0
31
84
0
81
58
9
3
28
1.45
109828--109890
22
3.0
22
82
13
62
19
1
6
73
1.13
109841--109888
16
3.0
16
77
17
55
18
0
4
77
0.93
109924--109965
21
1.9
23
85
9
61
19
0
4
76
0.96

Tables:   1

The End!