Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011645.1 Kokia drynarioides strain JFW-HI SEQ_126637, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100296

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--311
30
6.6
30
79
10
208
35
25
1
38
1.63
115--319
59
3.5
60
83
4
238
36
24
0
37
1.63
101--311
89
2.4
89
84
8
252
35
25
0
38
1.62
2715--2746
16
2.0
16
93
0
55
34
18
9
37
1.83
3873--4076
91
2.2
90
81
7
241
32
7
11
48
1.67
9597--9993
82
4.9
82
80
6
360
46
11
10
31
1.73
9559--9993
159
2.7
160
77
11
422
46
11
11
31
1.75
9834--10028
84
2.3
84
88
0
282
48
9
10
31
1.71
9677--9977
161
1.9
159
86
4
426
46
12
10
30
1.76
10177--10280
53
2.0
51
85
7
138
53
10
2
32
1.50
10751--10783
17
1.9
17
100
0
66
51
6
12
30
1.63
11374--11433
29
2.0
29
84
9
77
58
1
1
38
1.18
14995--15025
16
1.9
16
100
0
62
19
12
16
51
1.76
23449--23521
36
2.1
35
82
7
85
34
24
10
30
1.90
24353--24438
40
2.2
40
85
2
111
25
16
17
40
1.90
27737--27765
5
5.8
5
100
0
58
0
17
0
82
0.66
27999--28041
21
2.1
21
91
4
70
37
0
2
60
1.10
31046--31087
13
3.1
13
83
16
50
50
0
4
45
1.23
33503--33546
21
2.1
21
100
0
88
47
4
15
31
1.66
55811--55951
51
2.8
51
90
0
219
35
12
13
38
1.83
56703--56749
22
2.1
22
100
0
94
36
21
23
19
1.95
57461--57521
30
2.0
30
100
0
122
26
22
16
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59698--59722
7
3.6
7
100
0
50
0
28
0
72
0.86
61264--61301
20
1.9
20
94
0
67
31
34
7
26
1.85
64107--64169
33
1.9
33
83
3
83
36
7
19
36
1.81
64966--65057
45
2.0
45
100
0
184
30
13
21
34
1.91
64984--65055
22
3.2
22
66
11
65
26
12
23
37
1.90
73092--73143
2
26.0
2
100
0
104
50
0
0
50
1.00
81843--81908
34
1.9
34
84
6
89
19
19
13
46
1.83
81851--81908
17
3.4
17
75
0
53
20
17
13
48
1.81
82456--82485
13
2.4
12
89
10
51
83
0
16
0
0.65
83661--83694
17
2.0
17
94
0
59
26
11
14
47
1.79
85269--85374
53
2.0
53
100
0
212
39
16
20
22
1.92
88480--88779
138
2.1
137
84
7
377
44
2
9
44
1.48
90107--90132
3
8.7
3
100
0
52
69
0
0
30
0.89

Tables:   1

The End!