Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011648.1 Kokia drynarioides strain JFW-HI SEQ_126640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70043

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9391--9482
28
3.3
27
78
6
85
27
10
30
31
1.91
9405--9482
29
2.8
28
90
3
120
28
7
32
32
1.85
9584--9863
30
9.5
30
75
8
234
34
2
26
36
1.70
9600--9862
117
2.2
118
84
6
345
34
2
26
36
1.71
9600--9864
59
4.5
59
82
5
263
34
2
26
36
1.71
10832--10912
34
2.5
32
82
13
94
41
3
3
50
1.38
11611--11668
6
10.2
6
80
10
68
55
1
0
43
1.10
11611--11667
11
5.1
11
87
6
71
56
1
0
42
1.10
11617--11682
28
2.3
29
86
2
89
56
3
0
40
1.15
11580--11654
17
4.4
17
83
3
96
52
1
1
45
1.17
23742--23903
80
2.0
80
86
4
229
44
7
4
43
1.54
38067--38112
12
3.9
12
82
5
67
17
17
15
50
1.79
38195--38239
12
3.8
12
79
8
56
24
15
20
40
1.91
38200--38245
23
2.0
23
91
0
74
26
13
19
41
1.88
38835--38877
6
7.5
6
84
10
54
39
13
2
44
1.57
48842--49030
40
4.8
40
80
1
157
36
21
16
25
1.94
52007--52926
201
4.6
201
79
6
885
29
21
19
30
1.97
52038--52926
390
2.2
394
79
4
941
29
20
19
30
1.97
53030--53259
99
2.3
99
87
1
327
22
26
20
29
1.99
53221--53341
33
3.7
33
76
8
113
21
28
23
26
1.99
59989--60019
5
6.2
5
100
0
62
22
19
19
38
1.93
60247--60401
62
2.5
62
88
3
224
27
17
15
39
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63345--63386
20
2.1
20
86
0
57
26
21
38
14
1.91
63552--63950
86
4.6
86
90
5
610
48
3
5
42
1.43

Tables:   1

The End!