Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011653.1 Kokia drynarioides strain JFW-HI SEQ_126645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56294

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3110--3138
15
2.0
15
93
6
51
0
13
0
86
0.58
3104--3146
20
2.1
21
91
4
70
2
16
0
81
0.79
4077--4198
61
2.0
61
90
0
190
45
18
9
27
1.80
11847--11890
22
2.0
22
95
0
79
22
11
22
43
1.85
15622--15663
8
5.2
8
77
11
50
64
0
0
35
0.94
15622--15663
15
2.6
17
81
11
61
64
0
0
35
0.94
17372--17401
3
10.0
3
100
0
60
33
0
0
66
0.92
17653--17709
29
1.9
30
85
3
80
43
3
7
45
1.48
21807--21854
24
2.0
24
88
4
71
39
2
0
58
1.10
21833--21895
30
2.1
29
85
8
83
33
1
0
65
1.03
21833--21891
16
3.7
15
72
22
50
33
1
0
64
1.04
21849--21908
29
2.1
30
84
9
81
35
3
1
60
1.23
23765--23812
18
2.9
17
84
9
64
47
6
22
22
1.73
30227--30269
18
2.4
18
84
7
52
37
0
0
62
0.95
30238--30269
12
2.6
12
95
5
55
31
0
0
68
0.90
30520--30717
99
2.0
101
93
3
346
36
12
6
44
1.67
32755--32817
24
2.6
25
80
12
69
39
3
1
55
1.25
32761--32814
23
2.3
24
81
12
60
40
3
0
55
1.17
54013--54059
21
2.2
21
88
0
67
40
0
2
57
1.11
55910--55961
26
2.0
25
85
10
70
44
19
25
11
1.84
55888--55961
22
3.0
26
76
18
79
45
18
21
13
1.84
55957--56060
23
4.5
23
91
0
163
43
23
24
9
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55957--56060
46
2.3
46
93
3
183
43
23
24
9
1.83
56124--56171
24
1.9
26
84
16
66
31
22
0
45
1.53

Tables:   1

The End!