Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011669.1 Kokia drynarioides strain JFW-HI SEQ_126661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73930

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9706--10039
49
6.8
49
67
9
144
40
19
22
17
1.91
9651--10039
98
3.9
98
80
3
424
40
19
22
17
1.91
10732--10809
17
4.6
17
76
6
77
37
3
3
55
1.37
11394--11503
3
36.7
3
70
7
71
56
4
5
33
1.43
12577--12835
29
8.9
29
68
20
132
32
26
2
38
1.71
12582--12917
58
5.8
57
82
7
297
31
25
3
38
1.74
12582--12917
116
2.9
115
81
6
331
31
25
3
38
1.74
19649--19982
49
6.8
49
67
9
144
40
19
22
17
1.91
19594--19982
98
3.9
98
80
3
424
40
19
22
17
1.91
20675--20752
17
4.6
17
76
6
77
37
3
3
55
1.37
21337--21446
3
36.7
3
70
7
71
56
4
5
33
1.43
22520--22778
29
8.9
29
68
20
132
32
26
2
38
1.71
22525--22860
58
5.8
57
82
7
297
31
25
3
38
1.74
22525--22860
116
2.9
115
81
6
331
31
25
3
38
1.74
25176--25200
2
12.5
2
100
0
50
48
0
0
52
1.00
29346--29766
210
2.0
210
96
0
770
33
12
21
32
1.91
31729--31795
32
2.1
32
88
0
98
35
13
11
38
1.82
32972--33083
56
2.0
56
100
0
224
39
3
23
33
1.72
33442--33543
53
1.9
53
90
4
161
40
12
10
36
1.78
33937--34005
29
2.3
30
82
9
79
39
17
20
23
1.92
33953--34024
31
2.4
29
75
8
72
36
16
18
29
1.93
35031--35057
6
4.5
6
100
0
54
18
0
0
81
0.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37209--37244
6
6.0
6
100
0
72
0
66
0
33
0.92
43229--43263
15
2.3
15
90
0
52
28
20
0
51
1.47
52288--52756
29
16.1
29
81
9
429
33
3
27
35
1.73
52292--52757
59
8.0
57
82
7
481
34
3
27
35
1.72
53200--53709
261
2.0
258
90
3
817
21
30
17
29
1.96
54825--54865
17
2.5
16
88
7
64
63
4
0
31
1.15
56591--56668
23
3.2
26
76
15
71
44
2
1
51
1.23
64302--64332
5
6.2
5
92
0
53
77
0
3
19
0.90
69872--69929
27
2.1
28
87
9
84
63
1
3
31
1.21
72705--73048
30
11.8
28
73
15
227
31
4
30
33
1.77
72722--73048
89
3.7
88
78
13
339
31
3
29
34
1.76
72707--72969
117
2.2
117
84
6
343
31
4
30
33
1.77
72707--72973
59
4.6
58
85
3
331
31
4
31
33
1.77
72742--73040
59
5.1
58
82
11
267
32
3
29
34
1.75

Tables:   1

The End!