Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011674.1 Kokia drynarioides strain JFW-HI SEQ_126666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92100

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
934--1011
35
2.2
34
80
6
84
6
11
14
67
1.39
957--1011
18
3.1
17
71
23
51
7
10
12
69
1.37
1116--1168
26
2.0
26
85
3
70
49
15
9
26
1.74
4427--4456
16
1.9
16
93
6
53
13
0
30
56
1.37
6145--6188
20
2.2
20
83
0
52
29
2
2
65
1.16
6219--6289
10
7.6
10
80
16
66
32
1
0
66
1.01
6215--6280
9
7.4
8
76
20
60
31
1
0
66
1.01
6215--6289
19
4.1
19
80
16
88
32
1
0
66
1.00
6216--6289
29
2.7
29
83
10
84
32
1
0
66
1.00
7832--7904
29
2.6
29
78
6
78
30
6
6
56
1.52
8462--8489
2
14.0
2
100
0
56
50
0
0
50
1.00
13555--13615
22
2.8
22
90
7
90
72
0
11
16
1.13
13581--13610
15
1.9
16
93
6
53
70
0
13
16
1.18
14412--14454
19
2.3
19
84
8
52
58
4
0
37
1.19
21968--22023
28
2.0
28
96
0
103
41
17
8
32
1.81
28165--28191
2
13.5
2
100
0
54
51
0
0
48
1.00
29003--29100
46
2.2
46
96
1
180
18
17
20
43
1.88
35406--35449
14
2.8
16
80
16
56
52
0
0
47
1.00
39660--39738
41
1.9
41
100
0
158
37
12
13
35
1.83
46783--46835
3
17.7
3
100
0
106
33
0
0
66
0.92
47308--47337
3
10.0
3
100
0
60
66
0
0
33
0.92
51002--51036
2
17.5
2
100
0
70
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52913--53112
100
2.0
100
100
0
400
49
5
12
34
1.62
56127--56186
31
2.0
30
86
3
84
38
3
10
48
1.53
56516--56553
20
1.9
20
88
0
58
26
5
26
42
1.76
56746--56809
30
2.2
29
81
13
78
50
1
6
42
1.37
57205--57235
9
3.4
9
95
0
53
64
0
0
35
0.94
58615--58653
20
2.0
19
85
5
51
41
2
2
53
1.28
59205--59244
21
2.0
20
85
5
53
37
10
10
42
1.72
61605--61642
20
2.0
20
84
5
51
57
5
0
36
1.21
65143--65177
15
2.3
15
90
0
52
62
0
5
31
1.18
72813--72858
16
3.1
16
72
18
53
58
0
2
39
1.10
72876--72912
10
3.7
10
85
0
56
45
0
0
54
1.00
73789--73948
61
2.6
60
78
6
169
40
5
16
37
1.71
74030--74068
20
1.9
21
84
5
53
64
5
2
28
1.28
81879--81929
14
3.3
15
73
13
50
33
0
3
62
1.13
83924--83964
21
1.9
22
85
5
57
41
0
4
53
1.22
91563--91620
22
2.6
22
77
0
71
18
32
25
22
1.97
91563--91615
11
4.8
11
75
6
54
18
32
26
22
1.97
91641--91706
7
9.7
7
77
12
57
15
19
24
40
1.90
91641--91706
20
3.2
20
82
2
78
15
19
24
40
1.90

Tables:   1

The End!