Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011682.1 Kokia drynarioides strain JFW-HI SEQ_126674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  191822

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
329--353
13
1.9
13
100
0
50
20
64
0
16
1.30
574--609
18
2.0
18
94
0
63
38
2
0
58
1.13
14681--14994
158
2.0
158
94
0
547
27
21
29
21
1.99
27276--27525
60
4.2
60
90
2
405
31
8
20
40
1.81
27276--27525
118
2.1
119
91
1
403
31
8
20
40
1.81
28322--28442
45
2.7
45
81
0
143
32
18
23
26
1.97
28683--28781
19
5.3
19
85
3
112
34
3
24
38
1.71
36126--36250
45
2.8
45
81
0
160
30
21
24
24
1.99
36437--36498
19
3.3
19
90
0
97
37
1
22
38
1.64
43798--43872
24
3.1
24
90
0
114
24
24
21
30
1.99
46228--46278
24
2.1
24
96
0
93
29
25
19
25
1.99
53347--53605
130
2.0
129
99
0
500
27
22
20
29
1.98
58905--58955
24
2.1
24
85
0
66
56
7
9
25
1.58
70219--70258
19
2.0
20
95
4
73
62
15
7
15
1.53
71861--71887
14
1.9
14
100
0
54
44
7
7
40
1.60
87578--87678
37
2.8
37
93
1
177
22
28
14
33
1.94
95585--95621
18
2.1
18
89
0
56
13
35
8
43
1.74
95618--95658
3
13.7
3
90
10
66
2
31
0
65
1.05
100380--100413
16
2.1
17
88
5
52
41
8
11
38
1.73
107816--107845
14
2.2
14
94
5
53
36
10
23
30
1.87
118748--118812
32
2.0
32
100
0
130
27
15
18
38
1.91
119640--119671
15
2.1
16
88
11
50
15
6
0
78
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123620--123661
10
4.1
10
90
3
66
45
19
0
35
1.50
123620--123712
20
4.1
21
71
20
80
43
20
1
35
1.59
123628--123847
58
3.6
59
76
11
210
39
18
3
39
1.66
123573--123855
69
4.3
69
75
12
254
39
18
4
37
1.70
123745--123784
20
2.0
21
90
5
64
37
12
2
47
1.55
123813--123855
10
4.2
10
87
3
59
37
18
4
39
1.72
123926--124056
66
2.0
66
84
0
172
46
23
12
16
1.82
133250--133279
15
1.9
16
93
6
53
53
6
33
6
1.53
133611--133649
17
2.4
17
87
12
55
17
17
12
51
1.76
136120--136597
36
13.2
36
89
2
724
34
23
11
30
1.90
141473--141581
54
2.0
54
98
0
209
25
16
19
38
1.92
163418--163458
12
3.6
12
77
12
50
53
9
9
26
1.65
163409--163462
22
2.5
22
96
0
99
53
11
7
27
1.63
165774--165865
48
1.9
48
95
0
166
36
5
19
38
1.75
177757--177832
39
1.9
39
97
0
143
56
2
7
32
1.42
177767--177829
20
3.2
20
64
20
51
60
3
7
28
1.40
187519--187786
134
2.0
133
97
0
500
33
8
18
38
1.82
191174--191364
29
6.5
28
80
9
195
29
3
30
36
1.73
191174--191364
59
3.3
59
86
2
242
29
3
30
36
1.73

Tables:   1

The End!