Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011704.1 Kokia drynarioides strain JFW-HI SEQ_126698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58726

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3189--3232
22
2.0
21
86
4
61
52
11
2
34
1.50
4228--4265
19
2.1
19
85
14
53
60
7
7
23
1.51
6322--6377
21
2.7
21
91
2
96
55
12
7
25
1.62
7652--7685
13
2.6
13
85
0
50
73
0
17
8
1.08
17537--17565
3
9.7
3
100
0
58
0
0
31
68
0.89
17696--17727
2
16.0
2
93
0
55
0
46
0
53
1.00
21784--21855
26
2.8
28
81
14
91
37
0
16
45
1.48
22244--22291
23
2.0
24
92
4
80
56
0
4
39
1.19
22251--22299
23
2.2
23
81
3
55
55
0
2
42
1.11
24751--24777
12
2.2
12
100
0
54
51
0
25
22
1.48
24981--25050
29
2.4
30
83
7
81
48
10
15
25
1.76
31029--31083
24
2.3
24
90
0
83
54
10
10
23
1.67
33019--33073
24
2.3
24
87
0
83
54
12
10
21
1.68
33250--33280
15
2.1
15
93
0
53
45
9
9
35
1.70
33507--33541
16
2.2
16
89
0
52
45
0
2
51
1.16
34217--34259
21
2.0
21
82
8
52
58
4
0
37
1.19
35960--36004
22
2.0
23
91
4
74
11
6
0
82
0.84
37185--37246
10
5.6
10
78
17
61
40
0
9
50
1.35
37206--37252
23
2.0
23
91
4
76
44
0
4
51
1.21
37209--37261
23
2.2
24
83
9
65
47
0
3
49
1.19
37196--37261
34
1.9
34
84
3
87
45
0
4
50
1.22
39069--39311
87
2.8
85
80
5
243
39
21
2
37
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39069--39338
58
4.6
58
82
6
289
38
21
2
37
1.67
39069--39311
29
8.3
30
78
11
209
39
21
2
37
1.65
52954--53545
205
2.9
205
91
0
968
35
19
21
22
1.96
53363--53703
158
2.2
158
91
1
549
34
21
21
21
1.96
53157--53836
364
1.9
364
90
1
1085
34
19
22
23
1.96
54175--54256
11
7.0
12
72
15
73
42
3
1
52
1.26
54175--54256
6
14.0
6
73
14
73
42
3
1
52
1.26
54166--54256
17
5.2
17
83
11
96
42
3
1
52
1.24
54166--54256
36
2.6
35
86
8
123
42
3
1
52
1.24
56040--56294
29
8.8
29
76
10
202
37
23
1
37
1.65
56028--56294
59
4.6
59
79
9
257
37
24
1
36
1.67
56028--56294
117
2.3
116
81
10
305
37
24
1
36
1.67

Tables:   1

The End!