Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011718.1 Kokia drynarioides strain JFW-HI SEQ_126712, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85946

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
376--410
13
2.8
12
83
8
52
57
11
8
22
1.61
1734--1778
22
2.0
22
87
8
65
55
0
0
44
0.99
1813--1874
28
2.2
29
82
8
74
50
1
3
45
1.27
1897--1965
29
2.3
31
76
11
74
28
4
5
60
1.39
10256--10444
83
2.3
83
97
0
351
35
21
14
28
1.93
10414--10474
30
2.0
30
100
0
122
42
21
9
26
1.84
10331--10534
113
1.8
113
96
0
381
38
19
14
27
1.90
28930--28961
2
16.0
2
100
0
64
0
0
50
50
1.00
29592--29616
3
8.3
3
100
0
50
36
0
64
0
0.94
30925--30956
16
2.0
16
93
0
55
50
6
3
40
1.43
32936--32979
22
2.0
22
82
8
54
45
15
18
20
1.85
32983--33066
23
3.5
25
85
12
115
36
22
29
10
1.88
32984--33087
23
4.4
23
83
9
97
38
22
29
9
1.86
32983--33087
48
2.2
46
82
15
119
38
21
29
10
1.87
35099--35140
22
2.0
22
90
9
70
54
0
0
45
0.99
35086--35132
15
3.2
15
74
14
53
53
0
0
46
1.00
35079--35146
20
3.3
20
77
20
70
50
0
0
50
1.00
36968--37056
31
3.0
29
79
8
97
31
12
15
40
1.85
37085--37143
29
2.0
30
83
3
75
45
15
10
28
1.78
52220--52355
24
5.7
24
83
0
173
37
17
24
20
1.94
52233--52355
48
2.6
48
92
0
210
36
17
26
19
1.94
54800--54860
10
6.4
9
73
17
52
42
3
0
54
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54800--54886
18
4.8
19
69
18
69
43
2
1
52
1.21
54801--54899
18
5.4
18
72
18
64
40
3
2
54
1.27
55468--55511
22
2.0
21
86
4
61
45
2
2
50
1.27
55470--55546
28
2.8
26
79
9
66
44
2
2
50
1.29
61969--62013
22
2.0
22
86
0
63
28
22
35
13
1.92
65793--65855
30
2.1
30
100
0
126
44
9
14
31
1.77
65908--66027
64
1.9
64
98
0
231
51
7
10
30
1.64
72502--72741
30
8.1
30
72
17
173
36
5
26
32
1.78
72502--72737
59
4.0
59
80
9
234
37
4
26
31
1.77
73856--73887
3
10.7
3
100
0
64
34
0
0
65
0.93
74674--74734
6
10.0
6
74
22
56
54
1
0
44
1.10
74674--74762
17
5.4
17
82
10
112
53
3
1
41
1.24
75262--75695
49
8.9
49
69
9
276
17
25
18
38
1.92
75196--75695
98
5.1
98
84
2
657
18
24
18
38
1.93
75198--75695
196
2.5
196
88
2
732
18
24
18
38
1.93
83648--83685
18
2.1
18
90
0
58
52
0
10
36
1.36
83648--83707
15
3.7
16
78
10
52
46
0
11
41
1.40

Tables:   1

The End!