Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011721.1 Kokia drynarioides strain JFW-HI SEQ_126715, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79331

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8551--8842
59
5.0
57
78
8
236
36
3
24
35
1.71
8643--8842
29
6.8
29
77
5
170
36
2
25
36
1.67
10005--10063
28
2.3
24
80
13
64
42
0
5
52
1.23
10833--10883
6
8.8
6
75
16
54
50
0
5
43
1.26
10834--10895
17
3.6
18
84
6
83
56
0
4
38
1.21
11209--11238
14
2.1
14
100
0
60
53
0
33
13
1.40
18397--18471
37
2.0
37
97
0
141
24
9
21
45
1.81
19081--19186
53
2.0
53
96
0
194
19
16
15
48
1.82
22097--22141
19
2.4
19
85
7
56
22
26
20
31
1.98
22426--22458
17
1.9
17
100
0
66
24
9
30
36
1.86
26273--26374
51
1.9
53
84
11
138
25
8
14
50
1.71
26293--26393
51
2.0
51
82
3
123
23
9
14
51
1.72
30858--30900
21
2.0
22
82
13
54
30
2
0
67
1.03
34441--34487
21
2.2
21
81
7
51
34
4
0
61
1.15
36343--36405
27
2.4
25
80
15
72
31
4
3
60
1.33
39233--39258
2
13.0
2
100
0
52
50
0
0
50
1.00
45512--45569
30
1.9
30
83
13
75
63
0
0
36
0.94
51014--51071
27
2.1
28
87
9
84
12
32
22
32
1.91
51917--51957
21
2.0
21
85
9
57
29
2
0
68
1.03
53899--53948
26
1.9
26
95
0
91
34
24
8
34
1.84
76176--76214
20
2.0
20
85
10
53
20
7
0
71
1.10
78126--78154
3
9.7
3
100
0
58
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79051--79109
29
2.0
29
86
0
82
47
5
5
42
1.47
79162--79186
11
2.3
11
100
0
50
16
0
0
84
0.63

Tables:   1

The End!