Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011723.1 Kokia drynarioides strain JFW-HI SEQ_126717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71287

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5648--6588
200
4.7
202
84
5
1082
36
19
22
21
1.95
5645--6572
403
2.3
402
89
2
1404
35
19
22
21
1.96
5645--6750
403
2.7
402
86
5
1312
36
19
22
21
1.95
7073--7148
17
4.5
17
88
1
109
43
0
2
53
1.14
7073--7148
6
13.5
6
70
22
58
43
0
2
53
1.14
7070--7148
34
2.4
33
89
2
122
45
0
2
51
1.14
7180--7249
15
4.7
15
89
0
113
42
27
11
18
1.84
7871--7924
16
3.6
16
73
16
62
53
0
0
46
1.00
7889--7946
19
3.1
19
82
2
73
58
1
0
39
1.08
7896--7945
19
2.5
21
90
6
77
56
2
0
42
1.11
13997--14024
14
2.0
14
100
0
56
50
42
0
7
1.30
17211--17367
40
4.1
37
79
7
136
15
17
28
38
1.90
17232--17367
40
3.5
40
82
5
145
15
16
30
37
1.90
24282--24537
89
2.8
87
85
5
332
32
8
15
42
1.78
26493--26605
54
2.1
55
94
1
201
21
7
21
50
1.72
29586--29648
32
2.0
32
90
0
99
42
11
12
33
1.78
29655--29716
31
2.0
31
84
3
81
38
12
14
33
1.84
43712--43786
36
2.1
36
100
0
150
16
13
41
29
1.86
46429--46482
2
27.0
2
100
0
108
50
0
0
50
1.00
57408--57445
18
2.1
18
85
9
51
23
7
15
52
1.69
58548--58955
204
2.0
204
97
0
771
32
21
14
30
1.94
61014--61224
108
2.0
108
100
0
422
46
6
14
32
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69231--69326
31
3.1
31
68
21
76
27
18
9
44
1.80
69279--69338
31
1.9
31
86
0
84
31
20
6
41
1.78

Tables:   1

The End!