Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011737.1 Kokia drynarioides strain JFW-HI SEQ_126731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84214

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
203--256
16
3.6
16
69
19
53
46
1
0
51
1.11
182--238
19
2.9
19
86
5
78
40
1
1
56
1.20
878--948
15
4.7
15
82
0
97
19
9
26
43
1.82
980--1052
17
4.4
16
87
5
101
53
2
0
43
1.15
980--1047
6
11.8
6
72
20
56
52
2
0
44
1.16
1761--1880
49
2.5
49
93
2
199
19
29
17
34
1.94
1734--2149
201
2.1
201
95
0
742
20
24
19
34
1.96
1961--2081
49
2.5
49
86
2
165
23
27
15
33
1.95
12404--12472
34
2.0
34
97
0
129
23
30
21
24
1.99
14101--14265
28
5.7
28
65
13
66
32
6
29
31
1.82
14156--14480
59
5.5
59
77
10
199
33
5
27
34
1.79
14211--14481
30
9.2
29
73
16
193
31
5
27
35
1.80
14211--14480
59
4.6
58
78
9
216
31
5
27
34
1.80
14310--14481
89
1.9
90
89
3
267
30
4
28
36
1.78
15532--15585
16
3.6
16
73
16
62
48
0
0
51
1.00
15511--15560
19
2.5
21
93
6
86
44
0
2
54
1.11
15511--15567
19
2.9
19
86
5
78
42
0
1
56
1.10
16195--16288
15
6.3
15
91
0
143
14
14
30
39
1.87
16195--16288
45
2.1
45
97
0
179
14
14
30
39
1.87
16320--16387
16
4.1
16
79
5
73
50
5
0
44
1.26
16320--16387
17
4.1
16
79
5
64
50
5
0
44
1.26
20703--20753
24
2.0
25
85
7
68
60
9
5
23
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23636--23708
14
5.2
14
75
6
67
31
16
17
34
1.93
23643--23708
28
2.4
28
89
0
96
31
18
16
33
1.93
27651--27690
21
1.9
21
84
0
53
27
10
10
52
1.66
28846--29062
107
2.0
107
97
0
407
44
6
9
39
1.63
29926--29974
21
2.3
21
78
0
53
42
0
8
48
1.32
30443--30495
22
2.3
24
84
12
67
41
0
11
47
1.39
30454--30500
22
2.2
22
81
11
53
46
2
8
42
1.46
30658--30783
62
2.0
62
100
0
252
34
6
28
30
1.82
38435--38489
28
2.0
28
100
0
110
21
27
18
32
1.96
48227--48297
32
2.1
36
84
12
96
26
4
4
64
1.30
49481--49517
13
2.7
14
84
16
51
45
0
0
54
1.00
56827--58451
824
2.0
828
86
3
2295
26
20
21
31
1.98
59820--59872
18
3.3
15
76
21
54
52
0
1
45
1.11
59845--59916
18
3.9
19
75
15
62
45
1
1
51
1.18
65536--65570
7
4.9
7
89
3
52
65
0
0
34
0.93
65536--65572
14
2.5
15
86
8
58
64
0
0
35
0.94
69761--69814
28
2.0
27
81
3
63
62
7
3
25
1.38
73011--73145
49
2.8
49
80
4
148
28
11
28
31
1.92
74964--75032
26
2.7
26
93
0
111
23
23
30
23
1.99
74990--75317
158
2.1
158
86
2
453
30
23
23
22
1.99
75147--75503
196
1.8
196
84
1
491
30
24
22
22
1.99
76329--76367
21
1.9
20
85
15
53
41
7
0
51
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76660--76698
21
1.9
20
84
5
51
43
25
0
30
1.55
79257--79290
17
2.0
17
100
0
68
35
17
0
47
1.48
80476--80516
2
20.5
2
94
0
73
48
0
0
51
1.00

Tables:   1

The End!