Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011741.1 Kokia drynarioides strain JFW-HI SEQ_126735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38119

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43--108
4
16.2
4
76
9
62
1
34
0
63
1.04
43--109
13
4.7
15
76
20
72
1
35
0
62
1.04
49--106
29
2.1
27
87
6
80
1
34
0
63
1.04
449--473
10
2.5
10
100
0
50
84
0
0
16
0.63
839--905
29
2.2
30
79
12
75
50
8
5
34
1.58
963--992
7
4.3
7
91
0
51
43
10
0
46
1.37
966--999
14
2.4
14
95
0
59
47
5
0
47
1.26
1876--1918
22
1.9
23
85
4
61
37
0
4
58
1.19
7985--8016
3
10.7
3
93
0
55
3
65
0
31
1.08
8809--8993
78
2.4
78
99
0
361
30
16
7
45
1.73
12521--12601
31
2.6
30
78
14
76
50
8
4
35
1.55
17055--17091
18
2.0
20
84
10
51
51
5
0
43
1.24
18078--18109
15
2.0
17
88
11
50
28
0
3
68
1.04
19732--19794
17
3.7
17
80
0
81
41
3
3
52
1.33
19732--19811
34
2.3
34
78
6
90
42
3
3
50
1.38
19732--19811
17
4.7
16
74
10
61
42
3
3
50
1.38
21633--21907
58
4.7
58
82
7
317
32
27
3
36
1.74
21589--21871
29
9.8
29
70
15
151
32
26
3
37
1.73
21572--21909
58
5.8
58
80
9
305
32
25
3
37
1.73
32325--32952
49
12.7
50
76
7
527
39
19
23
16
1.92
32325--32888
199
2.9
197
81
5
608
39
19
24
16
1.91
32307--32952
99
6.6
99
80
5
467
39
19
23
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33350--33440
17
5.6
17
68
16
68
40
2
4
52
1.33
33352--33406
28
2.0
28
88
0
83
40
3
1
54
1.28
34017--34464
29
15.2
29
73
13
301
35
4
26
33
1.77
34117--34459
59
5.8
57
79
12
209
34
3
27
34
1.75
34118--34464
88
3.9
88
75
12
316
34
3
27
34
1.74
35472--35594
27
4.5
27
74
9
115
42
4
4
49
1.40
37117--37196
6
13.5
6
67
17
51
43
0
5
51
1.23
37140--37189
17
3.0
16
85
5
64
42
0
6
52
1.26
37847--37906
30
2.0
31
86
3
86
53
3
0
43
1.17

Tables:   1

The End!