Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011748.1 Kokia drynarioides strain JFW-HI SEQ_126742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52460

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415--501
20
4.4
20
75
16
67
67
2
4
25
1.21
611--655
24
1.9
24
81
4
56
71
6
0
22
1.09
7503--7531
15
2.0
15
93
6
51
37
0
0
62
0.96
8822--8865
4
11.0
4
95
0
79
25
0
22
52
1.48
15948--16004
26
2.2
27
78
15
66
31
3
1
63
1.22
17020--17061
22
2.0
22
85
4
59
30
19
19
30
1.96
17609--17717
30
3.6
30
79
4
114
36
20
8
34
1.82
17609--17764
30
5.2
29
74
8
107
37
20
7
33
1.81
17679--17765
29
2.9
29
79
3
102
36
21
8
33
1.83
17818--17855
19
2.0
20
89
5
60
26
10
2
60
1.43
21926--21986
17
3.4
18
84
11
81
81
0
18
0
0.68
21916--21986
17
4.0
17
82
12
72
80
0
19
0
0.72
21925--21986
11
5.5
11
80
16
74
80
0
19
0
0.71
22045--22079
14
2.4
15
85
4
54
74
2
22
0
0.95
22950--23068
33
3.7
33
77
7
145
72
5
20
1
1.14
23013--23050
20
1.9
20
84
10
51
76
7
15
0
1.01
22981--23082
32
3.2
32
75
8
125
67
4
23
3
1.27
22949--23082
65
2.1
65
100
0
268
70
5
20
2
1.22
23973--24187
49
4.4
49
78
6
222
35
15
25
23
1.94
24049--24207
49
3.2
49
70
11
146
36
15
27
20
1.93
24435--24613
46
4.0
46
81
5
197
32
20
16
30
1.95
24636--24807
76
2.3
75
82
4
202
41
15
20
22
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24764--24855
48
1.9
48
86
4
132
40
15
21
22
1.91
24687--25891
124
9.9
123
75
8
926
41
16
19
22
1.90
24687--25891
247
5.0
248
79
7
1209
41
16
19
22
1.90
24687--25891
371
3.3
369
80
7
1148
41
16
19
22
1.90
25382--25474
48
1.9
48
91
0
150
41
17
20
20
1.90
25514--25575
28
2.2
28
85
0
79
51
8
22
17
1.71
25438--25645
104
2.0
104
91
3
339
43
15
20
20
1.88
25316--25768
228
2.0
227
84
5
603
41
16
19
21
1.90
25571--25891
123
2.6
124
82
4
380
42
16
18
21
1.88
26931--26984
26
2.1
26
82
3
65
62
5
9
22
1.45
27654--27847
29
6.6
29
74
12
153
38
20
6
35
1.78
27637--27859
59
3.8
58
85
5
243
38
21
5
34
1.77
27644--27860
30
7.3
30
77
3
199
37
21
5
34
1.78
27714--27878
29
5.6
29
73
9
118
39
20
4
35
1.74
27773--27908
30
4.5
30
76
9
109
38
21
3
36
1.71
27690--27905
59
3.6
59
80
12
196
38
21
4
35
1.74
31793--31818
12
2.2
12
100
0
52
34
15
7
42
1.75
47811--47858
21
2.3
21
89
3
71
10
22
0
66
1.22
49761--49803
4
10.8
4
85
9
61
76
0
23
0
0.78
50175--50217
21
2.1
21
86
4
61
25
2
13
58
1.48
50477--50586
29
3.8
28
73
12
98
55
5
0
38
1.29
50489--50610
59
2.1
58
92
1
199
53
10
0
35
1.42

Tables:   1

The End!