Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011759.1 Kokia drynarioides strain JFW-HI SEQ_126754, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98581

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9574--9630
22
2.6
22
73
13
55
57
0
1
40
1.09
15295--15423
60
2.2
58
87
2
186
23
17
12
46
1.82
15322--15449
28
4.5
28
73
22
113
22
18
11
46
1.81
15324--15492
86
2.0
87
92
1
286
23
16
11
49
1.78
15409--15556
62
2.4
62
83
6
178
22
18
10
49
1.77
15317--15546
31
7.7
31
71
12
128
23
18
10
48
1.78
15717--15864
59
2.5
60
82
3
158
50
12
14
22
1.77
15741--15870
60
2.2
58
86
4
179
50
13
12
23
1.75
16809--16968
57
2.8
58
80
9
141
26
15
10
48
1.77
23158--23200
21
2.0
21
90
0
68
32
23
18
25
1.97
23161--23208
21
2.3
21
85
0
60
33
25
18
22
1.97
26500--26592
28
3.3
28
78
3
98
32
21
20
25
1.98
29239--29281
22
2.0
22
85
0
59
16
18
4
60
1.52
32515--32558
6
7.3
6
97
0
70
54
11
0
34
1.36
34285--34315
16
1.9
16
93
0
53
29
9
3
58
1.46
37948--38270
158
2.0
158
88
0
475
28
23
25
23
2.00
44288--44335
23
2.1
23
96
0
87
41
10
18
29
1.84
47228--47288
24
2.5
25
81
10
81
63
0
26
9
1.25
53693--53749
23
2.5
23
91
0
96
31
28
19
21
1.97
55472--55725
30
8.5
31
79
9
140
37
1
23
36
1.66
55572--55874
122
2.5
118
84
5
376
37
2
25
34
1.69
55550--55875
30
10.9
30
75
9
245
38
2
25
34
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55500--55876
30
12.7
29
75
6
202
37
2
24
35
1.69
56123--56181
29
2.0
30
83
9
77
55
1
11
30
1.46
61844--61903
24
2.5
24
94
0
102
15
26
16
41
1.88
65668--65854
29
6.4
29
70
12
98
36
3
25
34
1.72
65725--66079
30
12.1
29
71
7
191
39
3
23
33
1.71
65897--66059
87
1.9
87
84
7
224
41
4
20
33
1.72
67745--67825
35
2.4
34
89
2
126
56
3
1
38
1.25
67724--67832
6
18.3
6
68
17
59
52
3
1
42
1.30
67745--67831
17
5.1
17
84
2
111
56
3
2
37
1.29
68687--68746
29
2.0
30
84
9
79
51
6
5
36
1.50
68927--69236
155
2.0
155
96
0
575
44
12
7
35
1.70
71255--71359
24
4.4
24
93
0
174
30
22
20
25
1.99
72516--72546
16
1.9
16
93
0
53
35
12
3
48
1.58
75748--75827
24
3.3
24
92
0
124
31
23
18
26
1.98
80171--80197
2
13.5
2
100
0
54
48
0
0
51
1.00
86458--86536
41
1.9
41
89
5
124
21
1
12
64
1.34
86513--86538
12
2.2
12
100
0
52
23
0
7
69
1.14

Tables:   1

The End!