Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01011786.1 Kokia drynarioides strain JFW-HI SEQ_126781, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2348
ACGTcount: A:0.34, C:0.18, G:0.11, T:0.36


Found at i:1001 original size:14 final size:14

Alignment explanation


    Indices: 982--1008  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

        972 TTCTCTAGAA

                          
        982 ATCTCACTTAAAAT
          1 ATCTCACTTAAAAT

                         
        996 ATCTCACTTAAAA
          1 ATCTCACTTAAAA

       1009 AAATGGTAAA


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.44, C:0.22, G:0.00, T:0.33


Consensus pattern (14 bp):   
ATCTCACTTAAAAT
Done.