Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011791.1 Kokia drynarioides strain JFW-HI SEQ_126786, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  172411

Tables:   1   

This is table  1  of  1  ( 69 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2347--2372
12
2.2
12
100
0
52
38
7
0
53
1.30
2496--2526
2
15.5
2
100
0
62
48
0
0
51
1.00
6709--6877
89
1.9
89
93
2
295
40
14
8
36
1.76
7420--7444
12
2.1
12
100
0
50
60
0
0
40
0.97
8179--8247
29
2.4
28
81
11
79
42
1
7
49
1.39
10409--10439
13
2.3
14
94
5
55
12
9
38
38
1.77
19954--20576
40
15.9
40
77
5
508
26
14
25
33
1.94
19954--20656
78
9.0
78
78
7
502
26
15
24
33
1.95
19955--20594
118
5.4
116
77
7
540
25
15
25
34
1.95
19955--20654
40
17.9
39
76
7
488
26
15
24
33
1.95
20972--21212
50
4.9
50
74
1
180
17
32
16
34
1.92
22179--22225
11
4.5
10
80
17
51
0
12
4
82
0.80
22175--22199
13
1.9
13
100
0
50
0
8
8
84
0.79
23077--23118
18
2.3
18
84
15
52
0
28
0
71
0.86
28732--28786
18
2.9
18
78
7
65
23
14
45
16
1.84
28758--28796
18
2.2
18
85
0
51
25
17
46
10
1.80
36183--36214
16
1.9
17
93
6
57
75
6
18
0
1.01
36183--36230
18
2.8
17
82
17
55
72
4
22
0
1.01
37268--37320
6
9.5
6
80
12
60
86
0
11
1
0.64
37268--37321
7
7.4
7
82
13
56
87
0
11
1
0.63
37268--37322
11
5.0
11
84
6
76
87
0
10
1
0.63
41886--41934
15
3.1
15
82
5
53
24
4
0
71
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42099--42131
15
2.2
15
100
0
66
18
0
12
69
1.18
42365--42402
20
1.9
20
84
10
51
18
2
2
76
1.02
43551--43593
22
2.0
22
86
8
63
51
2
0
46
1.13
50450--50483
17
2.1
15
89
10
50
44
0
0
55
0.99
53356--53415
23
2.6
23
75
19
63
46
5
1
46
1.34
57213--57243
16
1.9
16
93
0
53
22
16
0
61
1.34
60180--60214
16
2.3
15
90
5
52
80
0
20
0
0.72
60649--60726
37
2.1
37
87
0
111
26
26
17
28
1.98
60748--60831
38
2.2
37
82
2
105
34
28
8
28
1.86
62757--62815
21
2.7
23
84
10
79
23
15
23
37
1.93
67130--67189
29
2.0
29
83
6
75
51
15
11
21
1.74
69577--69614
15
2.5
15
84
16
51
57
0
0
42
0.98
69641--69684
7
6.3
7
86
0
52
40
0
9
50
1.34
69605--69769
89
1.9
89
96
0
303
41
10
7
40
1.68
69737--69780
7
6.3
7
94
0
79
31
0
13
54
1.39
70166--70191
5
5.2
5
100
0
52
38
0
0
61
0.96
74576--74620
12
3.5
13
84
9
56
37
2
4
55
1.32
75397--75424
6
4.7
6
100
0
56
14
0
0
85
0.59
75916--75980
30
2.1
32
85
5
89
41
0
6
52
1.26
75924--75999
30
2.3
33
82
10
95
43
1
6
48
1.37
81230--81256
5
5.4
5
100
0
54
40
0
18
40
1.51
81230--81260
15
2.1
15
93
0
53
38
3
19
38
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81585--81625
16
2.4
18
84
15
61
9
0
12
78
0.98
81587--81633
11
4.3
11
78
8
51
8
0
12
78
0.95
81594--81633
16
2.5
16
84
8
55
7
0
12
80
0.91
82234--82288
16
3.4
16
87
5
76
40
5
25
29
1.78
82270--82364
44
2.1
46
84
11
126
32
6
25
35
1.81
82460--82584
58
2.2
58
88
2
180
50
2
0
46
1.20
88574--88641
32
2.1
32
97
0
127
35
20
11
32
1.89
89910--89940
15
2.1
14
94
5
53
25
29
0
45
1.54
109373--109423
3
17.0
3
95
0
93
33
1
0
64
1.05
112819--112861
10
4.2
10
78
3
50
11
2
2
83
0.83
133194--133221
2
14.0
2
100
0
56
50
0
0
50
1.00
136011--136094
42
2.0
42
100
0
168
47
7
14
30
1.71
137550--137597
17
2.8
16
78
12
51
62
8
10
18
1.52
144095--144130
3
12.0
3
93
0
63
2
0
33
63
1.08
152905--152940
6
6.0
6
100
0
72
0
66
0
33
0.92
153046--153092
21
2.1
21
88
7
67
38
17
34
10
1.84
156217--156259
9
4.8
9
82
8
52
32
0
0
67
0.91
156217--156260
19
2.3
20
81
18
58
34
0
0
65
0.93
159420--159455
12
3.0
12
91
0
63
50
19
0
30
1.48
161265--161327
32
2.0
32
90
0
99
34
20
15
28
1.94
164725--164764
20
2.1
19
85
4
53
45
15
12
27
1.82
167233--167284
20
2.6
20
93
0
95
9
34
19
36
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168190--168258
33
2.1
33
100
0
138
42
11
8
37
1.72
171800--171866
34
2.0
34
91
5
109
32
4
7
55
1.48
171806--171871
17
3.9
17
75
0
69
34
6
4
54
1.45

Tables:   1

The End!