Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011794.1 Kokia drynarioides strain JFW-HI SEQ_126789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84798

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
840--864
3
8.3
3
100
0
50
32
0
0
68
0.90
1084--1143
30
2.0
30
87
6
86
50
3
0
46
1.18
3885--4138
29
8.8
28
80
12
232
31
4
29
34
1.78
3885--4141
87
2.9
88
82
10
278
31
4
29
34
1.78
3943--4139
58
3.4
59
91
4
310
31
3
29
35
1.73
5178--5227
19
2.5
21
90
6
77
42
0
2
56
1.11
5177--5234
19
3.1
19
82
2
73
39
0
1
58
1.08
5297--5326
3
10.0
3
100
0
60
33
0
0
66
0.92
5864--5927
15
4.3
15
89
0
101
15
14
29
40
1.86
5865--5923
30
2.0
30
100
0
118
13
15
30
40
1.86
5960--6038
17
4.8
16
82
4
86
51
3
0
44
1.19
5960--6038
34
2.4
33
86
2
113
51
3
0
44
1.19
5960--6027
6
11.8
6
72
20
56
52
2
0
44
1.16
6724--6775
19
2.6
19
82
11
52
42
7
1
48
1.43
9784--9841
29
2.0
29
83
3
73
34
5
0
60
1.19
21713--21750
18
2.2
17
86
13
51
44
7
5
42
1.56
22742--22897
80
2.0
80
100
0
312
30
23
17
28
1.97
26472--26519
24
2.0
25
84
8
64
52
10
10
27
1.68
28506--28534
3
9.7
3
100
0
58
68
0
31
0
0.89
33860--33893
14
2.4
14
95
0
59
17
5
38
38
1.74
39069--39389
143
2.2
141
82
7
360
39
0
33
26
1.61
48886--48931
19
2.5
19
96
3
85
34
0
4
60
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51331--51425
29
3.2
29
73
18
70
65
2
1
31
1.11
52867--52942
19
4.0
20
67
18
54
50
3
0
46
1.20
56616--56646
6
5.2
6
96
0
53
16
19
45
19
1.86
63003--63035
10
3.4
10
83
8
50
39
0
0
60
0.97
68038--68062
2
12.5
2
100
0
50
0
48
0
52
1.00

Tables:   1

The End!