Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011797.1 Kokia drynarioides strain JFW-HI SEQ_126792, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61148

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2441--2472
17
1.9
16
93
6
55
31
6
25
37
1.81
2501--2544
20
2.1
21
87
4
63
45
0
2
52
1.13
8481--8522
18
2.3
18
83
0
57
9
16
0
73
1.08
11399--11456
21
2.9
20
77
7
64
36
5
1
56
1.32
11937--11972
14
2.5
15
91
8
58
25
0
0
75
0.81
12870--12947
37
2.1
37
100
0
156
29
15
21
33
1.94
24901--24953
22
2.4
21
81
9
61
39
0
7
52
1.30
33430--33464
16
2.4
14
90
9
52
60
0
5
34
1.21
42928--43063
64
2.2
61
88
4
191
23
14
13
47
1.80
43264--43322
31
1.9
31
86
6
84
45
5
15
33
1.68
44291--44370
30
2.7
30
78
3
81
65
3
1
30
1.18
44339--44387
22
2.3
21
89
3
71
63
4
2
30
1.24
45468--45606
29
4.7
29
76
4
118
32
3
30
33
1.75
45437--45607
88
1.9
90
84
4
231
32
4
28
34
1.76
47153--47231
17
4.7
17
85
6
99
55
3
0
40
1.18
47140--47187
23
2.1
23
92
7
80
52
2
0
45
1.12
47145--47204
23
2.6
23
84
7
68
53
3
0
43
1.17
47147--47204
6
9.8
6
77
22
61
51
3
0
44
1.18
47140--47197
10
5.8
10
74
22
59
53
1
0
44
1.10
59709--59899
29
6.4
30
80
8
221
31
1
29
37
1.67
59598--59899
59
5.1
59
74
11
235
31
2
29
36
1.71

Tables:   1

The End!