Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011802.1 Kokia drynarioides strain JFW-HI SEQ_126797, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48973

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2215--2239
2
12.5
2
100
0
50
52
48
0
0
1.00
5220--5255
18
2.1
18
89
5
56
41
0
25
33
1.55
9036--9110
31
2.5
30
81
12
91
45
20
12
22
1.83
10045--10084
3
14.0
3
84
10
57
0
35
0
65
0.93
11489--11537
26
2.0
26
88
8
75
51
4
0
44
1.20
17555--17587
16
2.0
17
94
5
59
33
6
0
60
1.21
17864--17931
31
2.2
30
87
10
93
30
7
13
48
1.69
17628--18077
169
2.6
170
85
3
577
34
9
11
44
1.74
22929--23821
459
1.9
450
85
6
1222
34
12
13
39
1.83
24635--24695
29
2.0
32
84
9
83
47
8
13
31
1.71
26839--26875
19
2.0
19
89
5
58
37
0
5
56
1.22
26844--26915
20
3.6
19
81
10
74
34
1
8
55
1.39
27979--28071
11
8.3
12
70
20
67
46
2
2
49
1.26
27979--28071
6
16.7
6
71
16
67
46
2
2
49
1.26
27965--28069
17
6.6
17
71
19
75
41
2
2
52
1.31
27984--28056
37
2.0
37
84
10
96
41
1
2
54
1.23
29475--29730
29
8.8
29
77
10
222
34
29
3
32
1.76
29475--29730
59
4.4
57
81
6
259
34
29
3
32
1.76
29996--30180
96
1.9
96
83
6
241
29
20
16
34
1.94
34807--34844
19
2.0
19
85
10
51
39
7
2
50
1.46
37459--37561
51
2.0
51
96
0
188
45
13
13
27
1.81
41457--41515
29
2.0
30
86
3
84
28
6
15
49
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41655--41727
31
2.4
31
81
2
85
46
10
8
34
1.69
44342--44409
3
22.7
3
100
0
136
67
0
0
32
0.91
44441--44619
30
6.1
30
76
7
136
40
2
22
34
1.67
44442--44613
87
2.0
88
81
5
206
41
1
22
34
1.64
46389--47050
201
3.2
202
85
4
790
22
21
16
38
1.93
47059--47181
39
3.1
39
78
3
138
30
16
26
26
1.97
47135--47222
45
1.9
46
84
11
119
28
12
29
29
1.93
47230--47610
41
9.3
40
79
10
357
29
19
19
31
1.96
47285--47579
80
3.6
80
78
10
312
29
18
19
32
1.96
48606--48644
18
2.2
18
86
9
53
20
23
0
56
1.42

Tables:   1

The End!