Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011804.1 Kokia drynarioides strain JFW-HI SEQ_126799, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101500

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2251--2313
24
2.6
24
82
0
72
49
7
15
26
1.72
4466--4828
195
1.9
194
81
6
448
28
26
15
28
1.96
5403--5494
9
11.2
9
65
23
51
48
0
0
51
1.00
5426--5474
25
1.9
26
87
4
73
46
0
0
53
1.00
5403--5498
41
2.4
42
89
8
146
48
0
0
51
1.00
9189--9213
8
3.1
8
100
0
50
52
0
24
24
1.48
9399--9432
14
2.2
16
90
10
54
38
8
17
35
1.81
24737--24766
14
2.1
14
93
0
51
16
6
3
73
1.18
25543--25572
15
1.9
16
93
6
53
16
10
0
73
1.09
25538--25598
22
2.8
22
90
7
90
14
9
1
73
1.16
25542--25598
21
2.6
22
89
8
82
14
8
1
75
1.11
32523--32567
19
2.4
19
81
7
56
37
0
4
57
1.19
32567--32596
14
2.1
14
93
0
51
16
6
3
73
1.18
33374--33403
16
1.9
16
93
6
53
16
13
0
70
1.18
33369--33412
22
2.0
22
86
8
63
18
11
0
70
1.16
36564--36592
13
2.1
14
93
6
51
75
0
17
6
1.01
39163--39208
19
2.4
20
82
17
62
60
2
15
21
1.45
51350--51379
15
1.9
16
93
6
53
53
6
33
6
1.53
57421--57478
17
3.4
17
82
0
62
50
10
15
24
1.75
57438--57486
17
2.9
17
81
0
62
48
12
18
20
1.79
66329--66376
22
2.2
22
81
7
53
25
4
31
39
1.74
67677--67714
20
1.9
20
88
0
58
26
26
23
23
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75490--75541
12
4.5
11
81
9
59
21
1
1
75
1.00
75490--75541
23
2.3
23
83
6
61
21
1
1
75
1.00
81463--81566
54
1.9
54
82
7
131
33
15
20
30
1.93
81466--81566
27
3.7
27
85
2
105
33
15
19
30
1.94
84452--84504
23
2.2
24
77
12
56
30
0
3
66
1.10

Tables:   1

The End!