Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011808.1 Kokia drynarioides strain JFW-HI SEQ_126803, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  250982

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
158--193
15
2.5
14
86
8
54
75
0
2
22
0.94
201--253
27
2.0
27
88
7
81
18
22
37
20
1.94
8571--8620
26
1.9
26
84
8
66
28
0
12
60
1.32
11627--11660
17
2.0
17
94
0
59
52
2
0
44
1.16
11958--12009
27
1.9
27
88
7
79
19
26
32
21
1.97
12480--12519
21
1.9
21
94
0
71
22
10
12
55
1.67
12583--12677
48
2.0
48
91
0
154
34
15
13
35
1.87
23927--23968
21
2.0
22
90
4
68
33
0
0
66
0.92
24188--24228
4
11.0
4
80
15
52
21
0
2
75
0.92
24188--24224
11
3.3
11
88
3
56
21
0
2
75
0.92
24185--24228
15
3.1
14
87
12
63
22
0
2
75
0.92
24304--24339
18
2.0
18
94
0
63
44
0
2
52
1.15
25332--25382
25
2.1
25
85
3
68
37
1
3
56
1.29
28866--28894
2
15.0
2
92
7
51
51
0
0
48
1.00
46432--46462
16
1.9
16
93
0
53
41
0
0
58
0.98
47447--47471
13
1.9
13
100
0
50
48
0
4
48
1.20
48597--48638
18
2.3
18
83
0
57
35
2
4
57
1.33
55545--55574
14
2.1
15
93
6
53
50
0
3
46
1.18
67867--67918
2
26.0
2
100
0
104
50
0
0
50
1.00
89019--89058
19
2.2
18
86
4
53
30
5
0
65
1.14
89206--89252
11
4.3
11
83
0
58
46
0
0
53
1.00
89427--89482
24
2.3
24
84
6
69
48
17
26
7
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113672--113713
19
2.2
19
86
4
57
30
0
0
69
0.89
121506--121537
2
16.0
2
100
0
64
50
0
0
50
1.00
123100--123138
2
19.5
2
94
0
69
46
0
0
53
1.00
129247--129275
3
10.0
3
92
7
51
68
0
0
31
0.89
129489--129525
20
1.9
20
88
5
58
21
13
2
62
1.44
135110--135139
13
2.2
14
94
5
53
0
0
10
90
0.47
138338--138362
2
12.5
2
100
0
50
52
0
48
0
1.00
141743--141767
2
12.5
2
100
0
50
0
52
0
48
1.00
149866--149926
21
3.0
21
85
2
79
6
9
14
68
1.36
149952--150003
24
2.3
23
84
12
65
17
3
17
61
1.49
155359--155399
21
2.0
21
85
9
57
48
12
0
39
1.41
159669--159804
71
1.9
70
87
1
200
33
16
19
30
1.94
165410--165625
106
2.0
106
99
0
423
37
15
12
34
1.85
167315--167353
19
2.1
19
100
0
78
43
5
10
41
1.61
167309--167357
19
2.4
21
83
13
75
48
6
8
36
1.58
174907--174945
2
19.5
2
100
0
78
0
0
51
48
1.00
180439--180464
2
13.0
2
100
0
52
50
0
0
50
1.00
186245--186277
7
5.0
7
92
7
52
90
0
9
0
0.44
188879--188917
18
2.2
18
86
9
53
30
5
10
53
1.56
189043--189195
76
2.0
76
98
0
297
44
18
8
28
1.79
189802--189836
18
1.9
18
88
0
52
25
0
2
71
1.00
190427--190458
17
1.9
17
93
6
57
62
3
0
34
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
217191--217233
19
2.3
19
84
8
52
58
4
2
34
1.32
218988--219034
4
11.8
4
100
0
94
51
0
23
25
1.49
222990--223042
23
2.3
23
87
6
72
43
20
26
9
1.82
223003--223053
23
2.2
22
82
6
57
49
17
23
9
1.77
225151--225340
95
2.0
95
96
0
353
32
16
22
28
1.96
225912--225961
18
3.0
15
85
14
55
68
10
4
18
1.34
245056--245108
29
1.9
27
81
11
63
24
5
13
56
1.58

Tables:   1

The End!