Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011809.1 Kokia drynarioides strain JFW-HI SEQ_126804, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56522

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10477--10898
205
2.1
205
95
0
765
37
22
20
19
1.95
13925--14108
29
6.3
29
79
9
178
36
31
1
30
1.67
13905--14108
87
2.3
88
82
7
245
37
30
2
29
1.70
13905--14111
59
3.5
58
81
6
247
37
30
2
29
1.72
16756--16792
17
2.2
17
86
13
51
62
2
0
35
1.10
35327--35380
22
2.3
23
84
6
65
61
5
1
31
1.30
35340--35385
24
2.0
22
87
8
65
67
2
0
30
1.03
36920--36968
19
2.6
18
81
12
62
30
20
16
32
1.94
40694--40820
67
1.9
67
87
6
186
25
15
17
40
1.89
40917--40968
9
5.9
9
77
8
54
42
0
1
55
1.10
40916--40954
18
2.2
18
90
0
60
43
0
2
53
1.14
40916--40980
30
2.1
31
88
11
98
43
0
1
55
1.09
46039--46110
6
12.3
6
74
11
53
41
2
4
51
1.35
46077--46115
16
2.4
16
86
0
51
48
2
2
46
1.29
46828--46868
16
2.6
16
88
3
57
63
0
2
34
1.08
47825--48014
29
6.5
29
75
11
129
36
22
2
38
1.66
47851--48014
29
5.6
29
76
11
140
35
25
1
37
1.67
47853--48135
59
4.8
60
86
5
316
34
27
2
35
1.72
47854--48137
30
9.6
30
70
20
147
33
27
2
35
1.72
47910--48160
59
4.3
59
87
2
330
33
27
3
35
1.73
47884--48160
29
9.4
29
71
9
125
33
27
2
36
1.72
47861--48160
118
2.6
117
82
5
356
33
27
2
36
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50222--50264
18
2.4
18
92
7
70
55
0
0
44
0.99
51437--51486
26
2.0
26
84
4
66
52
14
2
32
1.53
53019--53281
43
6.1
43
89
0
373
25
27
20
25
1.99
56353--56417
34
1.9
33
90
3
103
43
1
4
50
1.32
56342--56418
17
4.5
17
82
6
93
42
1
3
51
1.28

Tables:   1

The End!