Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001181.1 Kokia drynarioides strain JFW-HI SEQ_112515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43454

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6604--6636
14
2.3
15
84
5
50
27
0
9
63
1.24
8070--8115
23
2.0
23
82
0
56
36
13
21
28
1.91
8287--8419
70
1.9
67
86
4
185
35
12
11
41
1.78
8516--8561
21
2.1
21
84
8
56
41
8
4
45
1.55
8931--8975
19
2.2
20
84
11
56
33
6
4
55
1.46
9125--9149
9
2.8
9
100
0
50
12
0
8
80
0.92
9110--9187
4
19.0
4
76
5
66
24
3
3
67
1.24
10064--10100
17
2.2
17
90
0
56
40
0
0
59
0.97
10064--10099
18
2.1
17
89
5
54
38
0
0
61
0.96
10475--10534
28
2.1
28
82
11
70
40
1
0
58
1.08
10700--10743
23
1.9
23
85
0
61
59
0
2
38
1.10
12207--12288
31
2.8
29
79
7
76
42
18
10
28
1.84
12673--12808
67
2.0
67
100
0
272
36
19
13
30
1.90
16650--16683
13
2.5
14
85
9
52
0
17
0
82
0.67
34628--34677
18
2.8
17
82
17
57
62
2
2
34
1.18
34636--34688
15
3.3
15
80
19
63
62
0
1
35
1.06
34647--34694
18
2.5
20
76
10
55
66
0
2
31
1.03
37244--37319
39
1.9
39
89
0
116
23
14
19
42
1.88

Tables:   1

The End!