Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011817.1 Kokia drynarioides strain JFW-HI SEQ_126812, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39727

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2446--2472
2
13.5
2
100
0
54
0
51
0
48
1.00
7418--7460
20
2.1
21
86
4
61
39
2
9
48
1.48
13903--13976
25
3.0
24
73
13
71
64
0
1
33
1.02
13913--13996
16
5.0
16
77
9
69
63
0
2
34
1.08
14038--14105
27
2.6
27
83
6
77
66
1
2
29
1.15
15018--15049
4
8.0
4
100
0
64
75
0
0
25
0.81
15524--15793
102
2.6
101
87
2
378
24
24
23
27
2.00
15552--15724
35
5.1
36
66
17
109
22
24
24
28
1.99
17324--17390
30
2.2
32
86
7
95
26
5
11
55
1.59
17324--17390
31
2.2
30
86
7
91
26
5
11
55
1.59
20860--21020
80
2.0
80
97
0
304
36
15
9
38
1.81
26499--26545
23
2.0
23
95
0
85
29
19
19
31
1.96
30470--30519
16
2.9
16
79
8
55
72
2
0
26
0.96
30498--30562
30
2.2
30
91
5
105
61
0
0
38
0.96
30471--30542
9
7.9
9
75
15
51
68
1
0
30
0.99
30498--30577
30
2.7
29
79
11
74
62
0
2
35
1.09
30869--30914
22
2.1
22
87
0
65
32
4
0
63
1.14
30894--30968
30
2.5
29
79
12
73
41
4
0
54
1.19
30961--31003
19
2.2
20
80
12
54
41
0
0
58
0.98
30922--30976
29
1.9
29
85
3
76
43
3
0
52
1.18
31307--31351
19
2.4
19
88
0
63
55
0
8
35
1.31
36860--36897
19
1.9
19
89
5
58
55
2
39
2
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39331--39385
24
2.3
24
87
0
74
23
20
25
30
1.98

Tables:   1

The End!