Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011819.1 Kokia drynarioides strain JFW-HI SEQ_126814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75162

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--640
30
3.3
30
87
2
112
25
9
5
61
1.46
592--646
17
3.5
17
68
27
57
23
12
3
60
1.49
1541--1902
62
6.1
61
80
5
309
35
16
17
30
1.92
1541--1902
59
6.1
59
79
6
358
35
16
17
30
1.92
2190--2250
30
2.0
30
87
0
86
50
6
0
42
1.28
6236--6279
21
2.0
22
86
4
63
27
6
15
50
1.70
29196--29243
11
4.2
11
78
7
51
4
18
0
77
0.93
29630--29667
20
1.9
19
85
15
51
60
0
34
5
1.19
33549--33589
21
1.9
21
85
5
55
58
0
9
31
1.31
37000--37182
30
6.3
29
70
8
113
36
17
3
43
1.66
42445--42545
50
2.0
49
96
1
184
25
27
10
35
1.90
43740--43777
15
2.4
16
86
4
51
0
23
2
73
0.95
44478--44514
17
2.2
17
100
0
74
10
16
48
24
1.77
48177--48237
29
2.2
29
85
5
81
65
1
4
27
1.22
49745--49791
23
2.0
25
87
8
71
51
0
0
48
1.00
50121--50163
13
3.2
13
75
12
50
69
13
0
16
1.19
53480--53536
26
2.2
26
87
0
78
35
0
5
59
1.20
53495--53544
26
1.9
26
87
0
73
30
0
12
58
1.34
53610--53650
6
6.8
6
83
10
57
65
14
2
17
1.37
56047--56072
8
3.2
8
100
0
52
11
0
0
88
0.52
56600--56628
13
2.1
14
93
6
51
0
20
0
79
0.74
58355--58412
19
2.8
20
79
15
64
34
1
0
63
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61646--61679
12
2.6
14
86
13
54
38
2
0
58
1.13
61649--61678
13
2.4
13
94
5
53
40
3
0
56
1.16
65348--65863
30
17.3
31
76
6
216
37
2
24
35
1.70
65348--65870
60
8.8
59
80
7
488
36
2
24
35
1.70
65351--65870
179
2.9
177
79
8
509
36
2
24
35
1.70
65388--65870
149
3.2
145
77
9
449
36
2
24
36
1.69
65800--65878
29
2.7
29
86
5
97
49
2
15
32
1.58
71491--71560
30
2.4
28
81
13
79
31
4
4
60
1.36
72096--72270
23
7.8
22
68
20
96
44
20
23
12
1.84
74623--74680
28
2.2
26
87
9
82
62
3
0
34
1.12
75104--75161
17
3.5
17
90
2
91
39
0
3
56
1.16
75109--75159
6
8.8
6
77
16
54
41
0
3
54
1.19

Tables:   1

The End!