Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001182.1 Kokia drynarioides strain JFW-HI SEQ_112516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45406

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5289--5413
66
1.9
66
88
3
189
42
16
24
16
1.88
6188--6239
24
2.3
22
80
6
59
71
5
5
17
1.26
6346--6394
21
2.3
20
77
16
55
67
8
6
18
1.37
8300--8404
36
2.9
36
97
0
192
37
22
16
23
1.94
12052--12150
28
3.5
28
70
12
85
31
23
3
42
1.69
12052--12183
57
2.3
57
86
5
176
31
25
4
39
1.76
12050--12180
28
4.5
29
71
18
69
31
24
4
39
1.75
12080--12180
29
3.4
30
73
13
93
30
24
4
39
1.77
12052--12212
57
2.8
56
82
10
168
30
24
6
38
1.80
18925--18968
21
2.1
21
95
0
79
20
20
20
38
1.94
23959--24107
49
3.1
49
69
9
142
36
18
26
18
1.94
23921--24590
98
6.9
98
78
5
612
38
19
24
17
1.93
23974--24602
49
13.1
49
66
13
223
38
19
24
17
1.92
25262--25353
17
5.6
16
81
6
87
33
1
6
58
1.31
25262--25362
33
3.0
34
77
7
98
35
1
5
56
1.35
25331--25361
15
2.0
16
93
6
55
45
3
0
51
1.17
26021--26054
3
11.3
3
100
0
68
64
0
0
35
0.94
26053--26091
3
13.0
3
100
0
78
33
0
0
66
0.92
27312--27680
29
12.6
29
66
16
149
32
25
4
37
1.75
27312--27612
58
5.1
58
78
7
270
32
25
3
38
1.73
27316--27680
58
6.2
57
75
13
207
32
25
4
38
1.75
27638--27754
28
4.1
29
82
3
107
31
28
9
30
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27665--27754
28
3.2
28
85
3
128
32
26
11
30
1.91
39870--39984
34
3.4
34
96
1
203
30
51
8
9
1.65
39902--39958
12
4.9
12
71
16
57
29
54
7
8
1.58
41431--41790
30
12.1
29
75
11
200
36
23
2
38
1.68
41433--41789
60
6.0
60
79
9
333
36
22
2
38
1.68

Tables:   1

The End!