Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011850.1 Kokia drynarioides strain JFW-HI SEQ_126846, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97776

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
423--1291
95
9.3
93
87
5
1247
46
4
6
43
1.48
424--1291
184
4.7
185
88
5
1286
46
4
6
43
1.48
423--1291
278
3.1
276
90
4
1302
46
4
6
43
1.48
1276--1313
11
3.5
11
85
7
51
44
0
5
50
1.24
5264--5375
58
1.9
58
80
10
131
44
17
13
24
1.85
5442--5604
57
2.8
57
84
9
197
41
14
15
28
1.87
5155--5604
62
7.5
57
73
13
256
41
15
15
28
1.87
23760--23849
44
2.0
45
97
2
173
45
6
8
38
1.62
24706--24852
29
5.0
30
74
9
115
36
20
3
40
1.69
24670--24850
29
6.1
28
72
11
105
35
20
3
39
1.70
24711--24888
29
6.1
29
73
14
100
35
20
5
38
1.75
32911--32955
16
2.8
16
83
12
56
80
0
15
4
0.87
34055--34162
49
2.2
48
80
6
110
34
14
31
19
1.92
34377--34881
39
13.0
39
78
1
413
25
29
17
27
1.97
34904--35252
160
2.2
160
84
2
459
38
17
19
24
1.92
35064--35928
207
4.2
207
86
3
1111
39
17
19
22
1.92
35223--35392
85
2.0
85
86
2
234
40
16
20
23
1.91
35435--35600
85
2.0
84
83
3
208
37
17
22
22
1.94
35737--36050
122
2.6
122
85
3
391
42
17
19
21
1.90
36883--36910
14
2.0
14
100
0
56
42
7
14
35
1.73
37724--37833
58
1.9
58
87
7
161
40
19
0
40
1.58
37724--37887
30
5.6
29
74
9
127
37
20
2
39
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37724--37887
59
2.8
60
81
9
176
37
20
2
39
1.66
37815--37896
30
2.8
30
83
1
103
32
25
7
34
1.84
39398--39483
33
2.8
30
76
11
93
20
34
2
41
1.65
39633--39689
25
2.3
26
85
11
75
31
1
5
61
1.28
47532--47584
21
2.5
21
100
0
106
24
15
15
45
1.84
51193--51249
18
3.0
19
76
7
53
63
1
1
33
1.15
60264--60510
42
5.9
43
85
6
301
35
11
25
27
1.90
60264--60538
41
6.5
42
85
6
202
35
11
25
27
1.90
62753--62797
22
2.0
23
86
4
65
46
0
0
53
1.00
73691--73732
22
2.0
22
85
4
59
45
0
0
54
0.99
74614--74674
32
2.0
30
84
12
79
49
8
1
40
1.42
84752--84783
16
2.1
16
88
11
50
34
0
3
62
1.11
90496--90759
28
9.2
29
80
7
238
27
14
22
34
1.94
90451--90759
57
5.4
57
80
5
279
28
14
22
34
1.93
90559--90759
86
2.4
84
84
5
253
27
15
21
34
1.94
91937--91961
6
4.2
6
100
0
50
52
0
0
48
1.00

Tables:   1

The End!