Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011865.1 Kokia drynarioides strain JFW-HI SEQ_126862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96254

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3755--3786
12
2.7
12
100
0
64
18
15
50
15
1.79
7422--7718
148
2.0
149
93
0
515
31
4
28
35
1.77
9299--9373
27
3.0
23
74
18
62
52
4
0
44
1.20
9335--9394
10
5.7
10
76
16
59
65
1
0
33
1.03
23525--23561
12
3.0
13
84
7
51
78
0
13
8
0.96
24140--24177
16
2.4
16
82
13
51
39
0
0
60
0.97
24114--24182
26
2.8
23
78
20
68
37
0
0
62
0.96
24145--24202
26
2.2
26
81
9
64
34
0
1
63
1.04
25917--26009
40
2.3
40
94
0
159
22
23
9
44
1.82
26036--26181
41
3.5
40
82
6
157
28
21
10
39
1.86
26036--26196
84
1.9
82
81
5
189
28
21
10
39
1.86
27443--27513
37
1.9
37
85
0
97
64
2
16
15
1.40
31653--31704
21
2.5
21
90
3
79
50
1
7
40
1.42
32621--32826
53
3.6
59
76
12
180
31
17
12
38
1.87
32621--32845
57
3.9
58
76
11
214
29
18
13
38
1.89
33596--33646
18
3.2
18
64
30
51
66
0
5
27
1.14
33592--33657
30
2.2
29
92
7
107
66
0
6
27
1.15
34071--34095
12
2.1
12
100
0
50
0
32
40
28
1.57
34661--34774
21
5.3
21
73
12
97
59
4
5
30
1.39
38777--38820
15
2.8
17
83
13
58
34
0
2
63
1.07
45390--45489
36
2.8
37
87
6
152
35
29
13
23
1.92
48401--48446
23
2.0
23
100
0
92
13
8
30
47
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51097--51124
2
14.0
2
100
0
56
50
0
0
50
1.00
55503--55558
22
2.8
19
78
19
60
46
0
3
50
1.19
55685--55724
18
2.2
18
90
0
62
47
0
0
52
1.00
56446--56488
21
2.0
21
82
8
52
55
18
0
25
1.42
57765--57912
57
2.6
57
82
3
190
43
30
12
13
1.82
59245--59305
18
3.4
18
74
17
63
29
1
4
63
1.24
63216--63261
25
1.9
23
86
8
65
32
4
6
56
1.45
65160--65517
67
5.4
66
80
5
353
23
21
15
39
1.92
78066--78123
24
2.5
23
81
10
73
48
0
1
50
1.11
78872--78984
60
1.9
60
85
1
156
29
6
9
54
1.57
78920--79078
56
2.9
53
81
7
185
30
4
11
53
1.57
83775--83841
34
2.0
34
88
2
100
59
7
11
20
1.56
84677--84701
2
12.5
2
100
0
50
48
0
0
52
1.00
90290--90331
19
2.2
19
91
0
66
47
16
19
16
1.83
90687--90733
16
2.9
16
76
17
53
42
2
0
55
1.12
90663--90736
11
7.0
11
67
18
50
43
2
1
52
1.23
96226--96254
6
4.8
6
100
0
58
51
0
31
17
1.45

Tables:   1

The End!