Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011866.1 Kokia drynarioides strain JFW-HI SEQ_126863, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  171124

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--103
33
2.6
33
76
0
89
24
49
2
23
1.62
9751--9789
16
2.4
16
83
8
53
35
0
2
61
1.10
10810--10844
16
2.1
18
89
10
56
34
5
5
54
1.48
10989--11302
60
5.2
60
73
7
242
34
17
12
35
1.87
10891--11302
123
3.4
119
78
7
404
32
16
13
37
1.87
12105--12159
17
3.5
17
71
19
64
58
3
12
25
1.51
12105--12202
30
3.3
30
91
0
133
60
3
8
28
1.41
12720--12804
36
2.4
36
91
0
134
7
36
34
22
1.81
12752--12804
12
4.4
12
74
9
54
7
37
32
22
1.82
13458--13501
20
2.3
19
85
11
63
68
4
6
20
1.31
15607--15654
13
3.9
12
81
10
53
35
2
0
62
1.07
16371--16603
59
3.9
59
75
13
201
39
16
15
28
1.89
16563--16692
44
3.0
44
77
7
147
44
13
10
31
1.77
25341--25398
21
2.7
21
75
17
64
51
1
1
44
1.21
25843--25875
3
11.0
3
100
0
66
33
0
0
66
0.92
27618--27681
32
2.1
31
94
5
112
35
15
25
23
1.94
34770--34827
20
3.1
19
70
25
52
60
3
0
36
1.14
35463--35488
3
8.7
3
100
0
52
0
65
0
34
0.93
37310--37461
23
6.5
23
79
9
114
40
23
23
12
1.88
44082--44112
3
10.3
3
100
0
62
35
0
32
32
1.58
46508--46548
16
2.4
16
88
12
55
53
0
2
43
1.13
52134--52200
31
2.2
31
83
5
82
49
7
5
37
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52142--52202
31
2.0
31
90
6
97
47
3
6
42
1.45
71301--71466
83
2.0
83
98
0
323
36
9
6
46
1.63
82576--82679
52
2.0
52
100
0
208
44
13
19
23
1.86
85086--85119
4
8.5
4
100
0
68
23
0
26
50
1.50
95154--95316
60
2.7
60
81
8
172
23
14
11
50
1.74
95570--95663
29
3.1
30
73
18
79
48
6
18
26
1.71
97665--97694
6
5.0
6
100
0
60
16
0
50
33
1.46
109005--109035
3
10.3
3
92
0
53
67
3
0
29
1.06
110672--110725
27
2.0
27
85
7
74
38
18
5
37
1.74
113281--113312
6
5.3
6
92
0
55
15
31
37
15
1.89
114667--114742
30
2.5
30
93
0
125
21
32
11
34
1.89
123849--123877
2
14.5
2
100
0
58
51
0
0
48
1.00
134497--134521
2
12.5
2
100
0
50
48
0
0
52
1.00
143445--143484
16
2.5
16
92
8
64
60
30
5
5
1.40
143648--143698
24
2.1
24
92
0
84
54
9
11
23
1.66
145637--145687
24
2.1
24
92
0
84
54
11
11
21
1.68

Tables:   1

The End!