Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011873.1 Kokia drynarioides strain JFW-HI SEQ_126870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56819

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83--111
11
2.7
11
94
5
51
44
0
0
55
0.99
107--163
17
3.5
17
77
13
57
28
3
7
61
1.39
158--228
28
2.5
28
79
9
81
49
1
4
45
1.30
3935--3979
18
2.5
18
88
0
63
17
26
4
51
1.65
4331--4375
18
2.5
18
88
0
63
17
26
4
51
1.65
3650--4433
396
2.0
386
97
2
1478
27
18
16
36
1.92
5088--5147
26
2.4
24
86
10
84
60
0
3
36
1.14
5107--5152
16
2.8
16
81
12
58
63
0
6
30
1.20
5063--5144
35
2.3
35
79
10
87
59
1
3
35
1.23
5107--5146
17
2.4
16
87
4
53
60
0
5
35
1.19
5095--5144
25
2.0
26
92
4
84
60
0
4
36
1.16
5479--5719
120
2.0
121
97
1
450
29
21
31
16
1.95
6374--6477
51
2.0
51
100
0
208
46
25
5
23
1.74
12237--12314
31
2.5
31
97
0
147
61
2
5
30
1.31
17586--17675
40
2.2
40
82
7
103
32
5
14
47
1.67
17581--17675
20
4.8
20
76
8
77
31
6
13
48
1.68
18848--18895
25
2.0
22
88
11
69
62
12
4
20
1.46
19677--20121
222
2.0
222
98
0
854
26
12
14
46
1.80
20790--21032
101
2.4
101
79
4
258
26
18
18
36
1.94
20759--21066
50
6.1
50
66
11
130
26
19
17
36
1.94
20790--21063
101
2.7
100
72
9
227
26
20
16
36
1.93
21143--21332
50
3.8
50
81
6
170
26
23
14
35
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29371--29473
51
2.0
51
90
3
163
39
10
22
27
1.87
42551--42597
18
2.6
18
93
0
76
55
4
17
23
1.59
47921--47999
20
4.0
20
78
1
79
31
11
11
45
1.76
47910--47999
40
2.2
40
82
7
103
28
11
13
46
1.77
48457--48544
41
2.3
37
74
14
88
27
7
29
35
1.85
48461--48538
41
1.9
41
89
0
120
28
7
28
35
1.85
55345--55378
17
2.0
17
88
11
52
44
0
47
8
1.34

Tables:   1

The End!