Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011880.1 Kokia drynarioides strain JFW-HI SEQ_126877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90107

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
507--718
106
2.0
106
100
0
424
25
26
15
33
1.95
2171--2216
20
2.2
21
96
3
85
0
45
0
54
0.99
2205--2237
17
1.9
17
93
0
57
3
27
0
69
1.03
2474--2511
11
3.5
11
92
0
58
10
15
5
68
1.36
3111--3155
18
2.5
18
86
10
65
62
6
0
31
1.21
3749--3781
16
2.1
16
94
0
57
57
0
0
42
0.98
12794--12900
26
4.2
25
79
11
110
25
19
30
24
1.98
12794--12900
51
2.1
52
87
1
153
25
19
30
24
1.98
17477--17920
192
2.3
193
80
4
477
30
18
24
27
1.98
21219--21273
23
2.3
24
78
6
58
32
1
0
65
1.03
24825--24901
32
2.4
34
80
10
97
64
6
2
25
1.30
25277--25441
82
2.0
82
100
0
330
37
16
18
26
1.93
37904--38009
10
11.2
10
66
13
55
57
2
2
36
1.28
38962--39021
19
3.0
19
74
11
57
25
5
1
68
1.19
39066--39175
51
2.2
51
83
0
130
41
1
11
44
1.51
40677--40732
21
2.5
22
88
5
78
57
1
7
33
1.37
40828--40956
60
2.1
60
83
14
160
39
5
1
53
1.33
40864--40941
31
2.6
30
80
11
88
37
3
2
56
1.31
42042--42166
49
2.5
48
81
7
128
28
32
16
23
1.96
42983--43059
38
2.0
38
89
0
118
33
15
14
36
1.88
43022--43087
31
2.1
31
94
0
114
33
15
16
34
1.90
51070--51103
14
2.4
14
90
0
50
23
2
5
67
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59517--59593
39
1.9
41
82
10
97
36
7
3
51
1.49
69938--70193
72
3.6
72
82
0
287
30
16
27
25
1.97
70270--70432
77
2.1
78
85
3
213
38
21
18
22
1.94
70270--70432
39
4.2
39
84
1
211
38
21
18
22
1.94
70270--70451
39
4.7
39
84
2
179
37
20
18
23
1.94
76107--76148
16
2.5
17
84
7
59
50
0
9
40
1.35
80097--80179
26
3.1
29
62
31
74
37
8
4
49
1.55
80083--80185
52
2.0
51
96
1
188
35
8
5
49
1.58
85596--85636
21
1.9
22
85
5
57
43
0
2
53
1.13
88188--88312
65
1.9
65
95
0
223
34
4
20
40
1.73
88257--88287
15
2.1
15
100
0
62
41
0
25
32
1.56

Tables:   1

The End!