Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011886.1 Kokia drynarioides strain JFW-HI SEQ_126883, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42231

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
781--1065
30
9.6
30
79
4
265
36
29
3
30
1.74
786--1068
60
4.8
59
80
3
309
36
29
3
30
1.75
4224--4284
28
2.1
29
82
11
81
24
8
29
37
1.84
4384--4702
30
10.9
29
66
24
131
34
4
26
34
1.77
4253--4702
58
7.7
59
77
8
370
34
6
25
33
1.82
6617--6676
29
2.1
29
84
6
77
50
5
0
45
1.23
6604--6705
17
5.8
17
71
14
73
50
4
0
44
1.23
10125--10197
6
12.7
6
81
8
80
39
0
4
56
1.19
10124--10216
17
5.1
17
76
15
87
40
1
3
54
1.23
10131--10209
11
6.9
11
78
9
70
39
1
3
55
1.26
10125--10197
23
3.2
23
88
3
103
39
0
4
56
1.19
10889--10926
3
12.0
3
89
10
58
65
2
0
31
1.06
12087--12324
29
8.2
29
75
7
196
37
25
6
31
1.81
12024--12307
88
3.3
86
77
6
241
36
24
5
33
1.80
13604--13662
29
2.0
29
96
0
109
35
22
30
11
1.90
15447--15526
31
2.6
31
81
0
88
43
10
15
31
1.79
15392--15573
90
2.0
89
80
9
201
47
11
14
26
1.78
15792--15872
17
4.7
17
82
1
99
45
0
3
50
1.19
15792--15878
6
15.0
6
72
20
69
45
0
3
50
1.18
16658--16700
9
4.8
9
86
8
61
48
0
0
51
1.00
16609--16689
36
2.2
36
82
0
90
51
2
0
45
1.14
16612--16700
18
4.9
19
73
9
71
50
2
0
47
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17789--18171
29
13.1
29
71
14
182
34
26
3
34
1.74
17826--18223
59
6.8
58
80
10
388
33
25
4
36
1.76
17917--18175
29
8.8
29
75
16
214
34
27
3
33
1.75
17888--18223
117
2.9
116
83
9
407
33
26
4
35
1.77
24662--24893
116
2.0
117
92
3
389
26
17
11
44
1.83
25196--25295
52
1.9
52
81
4
121
47
3
4
46
1.36
34335--34365
2
15.5
2
100
0
62
48
0
0
51
1.00
41140--41183
20
2.3
19
84
11
54
29
6
9
54
1.58

Tables:   1

The End!