Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011892.1 Kokia drynarioides strain JFW-HI SEQ_126889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90219

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
559--628
25
2.6
28
80
13
76
32
2
2
61
1.25
592--640
25
2.0
25
88
8
73
28
2
8
61
1.36
1686--1774
46
1.9
46
97
0
169
44
12
17
24
1.83
1934--2288
23
15.4
23
88
0
494
33
4
14
47
1.65
1934--2288
69
5.1
69
91
0
548
33
4
14
47
1.65
4710--4740
15
2.1
15
93
0
53
64
0
0
35
0.94
6426--6554
66
2.0
66
93
3
224
31
22
21
24
1.98
7727--7814
40
2.2
40
85
2
115
39
10
12
37
1.77
18967--19006
20
1.9
22
90
10
66
50
0
0
50
1.00
28425--28463
12
3.2
12
78
7
51
58
2
0
38
1.12
33608--33670
22
2.9
22
75
0
72
39
20
25
14
1.90
37749--37804
16
3.5
16
76
9
60
57
5
0
37
1.22
39206--39246
12
3.6
12
74
12
50
70
12
0
17
1.16
39201--39246
22
2.1
22
100
0
92
69
13
0
17
1.19
40095--40133
20
2.1
19
90
9
62
46
17
5
30
1.70
47733--47785
3
17.7
3
77
14
56
0
28
0
71
0.86
50876--50924
18
2.7
18
93
0
89
26
14
16
42
1.86
52727--52757
2
15.0
2
93
6
53
48
3
0
48
1.17
61998--62067
29
2.4
29
90
7
106
50
1
1
47
1.19
69375--69418
18
2.4
18
80
3
52
54
2
38
4
1.33
74100--74547
147
3.1
146
83
1
522
39
19
26
15
1.91
74100--74557
49
9.4
49
73
3
312
38
19
26
15
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74435--74578
49
2.9
48
72
4
135
34
20
29
16
1.94
75249--75303
24
2.3
24
85
11
78
49
0
5
45
1.25
75984--76099
3
38.7
3
78
10
67
56
2
7
32
1.41
77191--77449
29
8.8
28
67
14
114
30
19
2
46
1.64
77189--77270
31
2.7
30
70
10
78
30
15
1
52
1.51
77140--77580
59
7.6
57
79
8
347
31
22
2
43
1.68
77140--77561
118
3.6
113
81
9
417
31
21
2
43
1.67
77338--77588
30
8.7
29
68
17
96
30
24
3
41
1.72
85949--85991
22
2.0
22
86
9
61
39
0
2
58
1.11
86373--86439
31
2.2
31
97
0
125
26
14
20
37
1.92
88075--88108
17
2.0
17
88
0
50
64
5
5
23
1.38
88938--88985
23
2.1
23
88
0
69
25
22
22
29
1.99
88948--88994
23
2.0
23
95
0
85
23
19
25
31
1.98

Tables:   1

The End!